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Start Over Graduate Program Chemical Engineering Degree PHD Committee Member Costas D Maranas

1. OPTIMIZATION-BASED FRAMEWORKS FOR THE ANALYSIS AND REDESIGN OF METABOLIC NETWORKS

open_access
Open Access
Author:
Burgard, Anthony P.
Title:
OPTIMIZATION-BASED FRAMEWORKS FOR THE ANALYSIS AND REDESIGN OF METABOLIC NETWORKS
Graduate Program:
Chemical Engineering
Keywords:
metabolic network
stoichiometric modeling
microbial strain design
File:
Download Thesis_Complete.pdf
Committee Members:
Costas D Maranas, Committee Chair/Co-Chair
Andrew Zydney, Committee Member
Darrell Velegol, Committee Member
Reka Z Albert, Committee Member

3. Optimization and control of multiscale process systems using model reduction: Application to thin-film growth

open_access
Open Access
Author:
Varshney, Amit
Title:
Optimization and control of multiscale process systems using model reduction: Application to thin-film growth
Graduate Program:
Chemical Engineering
Keywords:
Carleman Linearization
System Identification
Optimization
Dynamic Optimization
Modeling
Multiscale
Stochastic
Model Predictive Control
Receding Horizon Control
Thin film growth
Epitaxy
File:
Download mythesis.pdf
Committee Members:
Antonios Armaou, Committee Chair/Co-Chair
Costas D Maranas, Committee Member
Ali Borhan, Committee Member
Joan Marie Redwing, Committee Member
Andrew Zydney, Committee Member

4. DEVELOPMENT OF HYBRID INTRACELLULAR/EXTRACELLULAR MODELS OF BRAIN TUMOR PROGRESSION AND MEDICATION STRATEGIES

open_access
Open Access
Author:
Vital-Lopez, Francisco Gamaliel
Title:
DEVELOPMENT OF HYBRID INTRACELLULAR/EXTRACELLULAR MODELS OF BRAIN TUMOR PROGRESSION AND MEDICATION STRATEGIES
Graduate Program:
Chemical Engineering
Keywords:
Modeling
Brain tumor
Angiogenesis
Temozolomide
Chemotaxis
Simulation
File:
Download Vital-Lopez_Dissertation.pdf
Committee Members:
Antonios Armaou, Dissertation Advisor/Co-Advisor
Antonios Armaou, Committee Chair/Co-Chair
Costas D Maranas, Committee Chair/Co-Chair
Ali Borhan, Committee Member
Patrick Cirino, Committee Member
Christine Dolan Keating, Committee Member
Andrew Zydney, Committee Member

5. Modeling and Optimization in Directed Evolution Protocols and Protein Engineering

open_access
Open Access
Author:
Moore, Gregory Lee
Title:
Modeling and Optimization in Directed Evolution Protocols and Protein Engineering
Graduate Program:
Chemical Engineering
Keywords:
directed evolution
protein engineering
optimization
File:
Download thesis.pdf
Committee Members:
Costas D Maranas, Committee Chair/Co-Chair
Ali Borhan, Committee Member
Patrick Cirino, Committee Member
Stephen James Benkovic, Committee Member
Andrew Zydney, Committee Member

6. COMPUTATIONAL DESIGN AND EXPERIMENTAL CHARACTERIZATION OF PROTEINS WITH NOVEL FUNCTIONS

open_access
Open Access
Author:
Fazelinia, Hossein
Title:
COMPUTATIONAL DESIGN AND EXPERIMENTAL CHARACTERIZATION OF PROTEINS WITH NOVEL FUNCTIONS
Graduate Program:
Chemical Engineering
Keywords:
OptGraft
Protein engineering
Computational protein design
Enzyme cofactor alteration
IPRO
File:
Download Fazelinia_Dissertation.pdf
Committee Members:
Costas D Maranas, Dissertation Advisor/Co-Advisor
Costas D Maranas, Committee Chair/Co-Chair
Patrick Cirino, Committee Chair/Co-Chair
David D Boehr, Committee Member
Andrew Zydney, Committee Member

7. Examining Initial Bacterial Adhesion: Oriented Adhesion and Surface Nanodomains

open_access
Open Access
Author:
Jones, Joseph Francis
Title:
Examining Initial Bacterial Adhesion: Oriented Adhesion and Surface Nanodomains
Graduate Program:
Chemical Engineering
Keywords:
bacterial adhesion
bacterial polarity
laser trap
orientation
adhesion
nanodomain
File:
Download 11-02-05_Thesis.pdf
Committee Members:
Darrell Velegol, Committee Chair/Co-Chair
Seong H Kim, Committee Member
Costas D Maranas, Committee Member
John Michael Regan, Committee Member
Andrew Zydney, Committee Member

8. ENGINEERING AND ANALYSIS OF COFACTOR PARTITIONING FOR NADPH-DEPENDENT XYLITOL PRODUCTION IN ESCHERICHIA COLI

open_access
Open Access
Author:
Chin, Jonathan W
Title:
ENGINEERING AND ANALYSIS OF COFACTOR PARTITIONING FOR NADPH-DEPENDENT XYLITOL PRODUCTION IN ESCHERICHIA COLI
Graduate Program:
Chemical Engineering
Keywords:
xylitol
cofactor regneration
E. coli
metabolic engineering
biotransformation
File:
Download PS_Thesis_JWC_051810_-_Final.pdf
Committee Members:
Dr Patrick Cirino, Dissertation Advisor/Co-Advisor
Patrick Cirino, Committee Chair/Co-Chair
Costas D Maranas, Committee Member
Wayne Roger Curtis, Committee Member
Ali Demirci, Committee Member

9. DEVELOPMENT OF COMPUTATIONAL TOOLS FOR THE DESIGN AND OPTIMIZATION OF COMBINATORIAL PROTEIN LIBRARIES

open_access
Open Access
Author:
Saraf, Manish Chandra
Title:
DEVELOPMENT OF COMPUTATIONAL TOOLS FOR THE DESIGN AND OPTIMIZATION OF COMBINATORIAL PROTEIN LIBRARIES
Graduate Program:
Chemical Engineering
Keywords:
protein engineering
directed evolution
bioinformatics
protein library design
optimization
File:
Download Thesis.pdf
Committee Members:
Michael Pishko, Committee Member
Patrick Cirino, Committee Member
Stephen James Benkovic, Committee Member
Andrew Zydney, Committee Member
Costas D Maranas, Committee Chair/Co-Chair

10. From Bacterial Adhesion to Biofilm Formation: Impact of Humic Acid and Quorum Sensing

open_access
Open Access
Author:
Parent, Mary Elizabeth
Title:
From Bacterial Adhesion to Biofilm Formation: Impact of Humic Acid and Quorum Sensing
Graduate Program:
Chemical Engineering
Keywords:
autoinduction
cell signaling
diffusion modeling
luminescence
population dependence
File:
Download ThesisMaster.pdf
Committee Members:
Darrell Velegol, Committee Chair/Co-Chair
Costas D Maranas, Committee Member
Michael Pishko, Committee Member
John Michael Regan, Committee Member
Andrew Zydney, Committee Member