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Author:

Watson, Kelsey

Title:

INVESTIGATING ZNSE MN2+ DOPED NANOCRYSTALS FOR USE IN PHOTOCATALYSIS

Graduate Program:

Chemistry (PHD)

Keywords:

Mn:ZnSe
doped
nanocrystal
photocatalysis
green energy

File:

Download Dissertation_Watson_Final_1.pdf

Committee Members:

Benjamin Lear, Major Field Member
Robert Hickey, Outside Unit & Field Member
John Asbury, Chair & Dissertation Advisor
Raymond Schaak, Major Field Member
Philip Bevilacqua, Program Head/Chair

Author:

Cheon, Seong Ik

Title:

EMERGING BEHAVIORS FROM PARTICLES AT LIQUID INTERFACES

Graduate Program:

Chemistry (PHD)

Keywords:

Pickering emulsions
Active emulsions
Oil-oil Emulsions
Particle adsorption at interface

File:

Download Supplemental_videos.zipDownload Seong_Ik_Cheon-Final_Thesis_submission.pdf

Committee Members:

Robert Hickey, Outside Unit & Field Member
Christine Keating, Major Field Member
Miriam Freedman, Major Field Member
Lauren Zarzar, Chair & Dissertation Advisor
Philip Bevilacqua, Program Head/Chair

Author:

Gentile, Kayla

Title:

Transport and Assembly in Active Systems

Graduate Program:

Chemistry (PHD)

Keywords:

micropumps
fluid motion
catalysis
enzymes
protein aggregation

File:

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Committee Members:

Thomas Mallouk, Major Field Member
Christine Keating, Major Field Member
James Adair, Outside Unit & Field Member
Ayusman Sen, Chair & Dissertation Advisor
Philip Bevilacqua, Program Head/Chair

Author:

Xu, Jiansong

Title:

Reconsidering the czcD (NiCo) riboswitch as iron (II) riboswitch

Graduate Program:

Chemistry (PHD)

Keywords:

Irving-William series
metalloregulation
RNA
iron
metal selectivity
riboswitch
metal sensor
czcD riboswitch
NiCo riboswitch
metal overload

File:

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Committee Members:

Xin Zhang, Major Field Member
Joseph Cotruvo, Chair & Dissertation Advisor
Philip Bevilacqua, Major Field Member
Philip Bevilacqua, Program Head/Chair
Emily Weinert, Outside Unit & Field Member

Author:

Veenis, Andrew

Title:

Towards a Better Understanding of the Influence of Noncovalent Interactions on RNA Catalysis and the Properties of RNA Moieties

Graduate Program:

Chemistry (PHD)

Keywords:

RNA
Ribozyme
pKa
Cheminformatics
Bioinformatics
Molecular Dynamics

File:

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Committee Members:

Lasse Jensen, Major Field Member
Song Tan, Outside Unit & Field Member
Joseph Cotruvo, Major Field Member
Philip Bevilacqua, Chair & Dissertation Advisor
Philip Bevilacqua, Program Head/Chair

Author:

Bui, Pho

Title:

Nonadditive Effects of Cosolvent Mixtures on Protein Stability in Aqueous Solutions

Graduate Program:

Chemistry (PHD)

Keywords:

nonadditivity
ion specific effects
ion-pairing
cosolvent
protein stability
complex solutions
vibrational spectroscopy

File:

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Committee Members:

Paul Cremer, Chair & Dissertation Advisor
William Noid, Major Field Member
Tae-Hee Lee, Major Field Member
Lauren Zarzar, Major Field Member
Philip Bevilacqua, Program Head/Chair
Seong Kim, Outside Unit & Field Member

Author:

Judd, Kenneth Duane

Title:

Investigating Specific Cation Interactions with Anionic Surfactant Monolayers at the Air/Water Interface Using Nonlinear Spectroscopy and Thermodynamics

Graduate Program:

Chemistry (PHD)

Keywords:

ion pairing
ion specific effects
monolayers
spectroscopy
nonlinear optics
vibrational spectroscopy
thermodynamics
surfactants

File:

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Committee Members:

Paul Cremer, Chair & Dissertation Advisor
Benjamin Lear, Major Field Member
Seong Kim, Outside Unit & Field Member
Mark Maroncelli, Major Field Member
Philip Bevilacqua, Program Head/Chair

Author:

Dey, Madhuri

Title:

Reconstituting the 3D Breast Cancer Microenvironment for Chemo and Immunotherapy

Graduate Program:

Chemistry (PHD)

Keywords:

Breast cancer
3D tumor models
Chemotherapy
Immunotherapy
MAIT-MR1
3D bioprinting
Perfusion
Tumor Angiogenesis
Cancer Invasion

File:

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Committee Members:

Paul Cremer, Major Field Member
James Connor, Outside Unit & Field Member
Christine Keating, Co-Chair & Dissertation Advisor
Lauren Zarzar, Major Field Member
Philip Bevilacqua, Program Head/Chair
Ibrahim Ozbolat, Co-Chair & Dissertation Advisor

Author:

Crowe, Charles

Title:

Aqueous Phase Separation within Water-in-Oil Emulsions as Cellular Models

Graduate Program:

Chemistry (PHD)

Keywords:

liquid-liquid phase separation
phase separation
microfluidics
neutral polymer phase separation
emulsion
water-in-oil
coacervation
bioinspired
artificial cell
microscopy
droplet

File:

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Committee Members:

Philip Bevilacqua, Program Head/Chair
Paul Cremer, Major Field Member
Peter Butler, Outside Unit & Field Member
Scott Showalter, Major Field Member
Christine Keating, Chair & Dissertation Advisor

Author:

Tanygin, Vivian Sergei

Title:

Surface Chemistry of Transition Metal Nanoparticles

Graduate Program:

Chemistry (PHD)

Keywords:

nanoparticles
xps
epr
chalcogen
noble metal
nanomaterials
inorganic
electronic properties
esr
morphology
surface chemistry
nmr

File:

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Committee Members:

Benjamin Lear, Chair & Major Field Represnt
Lasse Jensen, Committee Member & Major Field Represnt
Raymond Schaak, Committee Member & Major Field Represnt
John Golbeck, Committee Member & Related Areas Repres
Philip Bevilacqua, Program Head/Chair
Benjamin James Lear, Dissertation Advisor

Author:

Di Monte, Kristin

Title:

Morphology Dependent Optical Properties of Mixed Organic/Inorganic Aerosol Particles

Graduate Program:

Chemistry (MS)

Keywords:

Aerosol Particles
Aerosol
Optical Growth Factor
fRH
Hygroscopicity
Hygroscopicity Parameter
Water Soluble Organic Compounds
Cavity Ring-Down Spectroscopy
CRDS
Multicomponent
Inorganic Salt

File:

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Committee Members:

Philip Bevilacqua, Program Head/Chair
Miriam Arak Freedman, Thesis Advisor/Co-Advisor
Benjamin James Lear, Committee Member
Kenneth Luther Knappenberger, Jr., Committee Member
Eugene Edmund Clothiaux, Committee Member

Author:

Persichetti, Joseph

Title:

Understanding the Role of Multiple Pathways in Enzyme Catalysis with a Hierarchical Markov State Model

Graduate Program:

Chemistry (PHD)

Keywords:

molecular dynamics
markov state model
QM/MM
enzyme kinetics
alanine dipeptide
dihydrofolate reductase
computational
free-energy simulations
finite-temperature string method

File:

Download Joseph_Persichetti_PhD_Thesis_FinalSubmission.pdf

Committee Members:

Lasse Jensen, Major Field Member
Howard Salis, Outside Unit & Field Member
Edward O'Brien, Chair & Dissertation Advisor
Squire Booker, Major Field Member
Philip Bevilacqua, Program Head/Chair

Author:

Mandell, Zachary

Title:

MECHANISMS OF INTRINSIC TRANSCRIPTION TERMINATION AND RIBONUCLEOLYTIC DECAY IN Bacillus subtilis

Graduate Program:

Biochemistry, Microbiology, and Molecular Biology (PHD)

Keywords:

transcription
genomics
transcriptomics
RNA biology
translation
Microbiology

File:

Download Electronic_Dissertation.pdf

Committee Members:

Paul Babitzke, Chair & Dissertation Advisor
Istvan Albert, Major Field Member
Timothy Meredith, Outside Field Member
Philip Bevilacqua, Outside Unit Member
Katsuhiko Murakami, Major Field Member
Wendy Hanna-Rose, Program Head/Chair

Author:

Mattocks, Joseph

Title:

Characterization and Application of Lanthanide-Binding Proteins for Rare-Earth Separations

Graduate Program:

Chemistry (PHD)

Keywords:

Rare earth element
Lanthanide
Protein
Separation
Bioremediation
Extraction

File:

No files available due to restrictions.

Committee Members:

Joseph Cotruvo, Chair & Dissertation Advisor
Scott Lindner, Outside Unit & Field Member
Philip Bevilacqua, Major Field Member
Squire Booker, Major Field Member
Philip Bevilacqua, Program Head/Chair

Author:

Mcbride, Molly Jo

Title:

Structural Basis for Cofactor Assembly in the Novel Heme-Oxygenase-Like Diiron Oxygenase Superfamily

Graduate Program:

Chemistry (PHD)

Keywords:

diiron oxygenase
x-ray crystallography
cofactor instability
biochemistry
metalloenzymes
heme-oxygenase-like diiron oxygenases
HDOs

File:

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Committee Members:

Joseph Cotruvo, Major Field Member
Amie Boal, Chair & Dissertation Advisor
Philip Bevilacqua, Program Head/Chair
C Okafor, Outside Unit & Field Member
Carsten Krebs, Major Field Member
Joseph Bollinger, Co-Chair of Committee

Author:

Choi, Saehyun

Title:

COMPLEX COACERVATES AS EXPERIMENTAL MODEL SYSTEMS FOR PREBIOTIC COMPARTMENTS AND CELLULAR BIOCONDENSATES

Graduate Program:

Chemistry (PHD)

Keywords:

Coacervates
liquid-liquid phase separation
origin of life
protocell
biocondensates
RNA chemistry
thermodynamics

File:

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Committee Members:

Paul Cremer, Major Field Member
Christine Keating, Chair & Dissertation Advisor
Philip Bevilacqua, Major Field Member
Philip Bevilacqua, Program Head/Chair
Christopher House, Outside Unit & Field Member

Author:

Guo, Zixuan

Title:

Understanding the morphology at donor-acceptor interfaces in organic semiconductors

Graduate Program:

Chemistry (PHD)

Keywords:

Organic semiconductors
Heterojunction
Interface morphology

File:

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Committee Members:

Benjamin Lear, Co-Chair & Major Field Member
Robert Hickey, Outside Unit & Field Member
Enrique Gomez, Co-Chair & Dissertation Advisor
Raymond Schaak, Major Field Member
Philip Bevilacqua, Program Head/Chair

Author:

Hendrickson-Stives, Albanie

Title:

Towards Responsive Optical Microstructures: Directed Particle Assembly and 3D Microprinting

Graduate Program:

Chemistry (PHD)

Keywords:

directed particle assembly
alternating current
metamaterials
3D microprinting
optical responses

File:

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Committee Members:

Mikael Rechtsman, Outside Unit & Field Member
Christine Keating, Chair & Dissertation Advisor
Raymond Schaak, Major Field Member
Lauren Zarzar, Major Field Member
Philip Bevilacqua, Program Head/Chair

Author:

Chen, Ran

Title:

Understanding Surface-enhanced Raman Scattering Using a Raman Bond Model

Graduate Program:

Chemistry (PHD)

Keywords:

Surface-enhanced Raman Scattering
Plasmonics
Raman Bond Model
Electronic Structure Methods
Density Functional Theory

File:

Download RanChen-PSUThesis.pdf

Committee Members:

Benjamin Lear, Major Field Member
William Noid, Major Field Member
Lasse Jensen, Chair & Dissertation Advisor
Michael Janik, Outside Unit & Field Member
Philip Bevilacqua, Program Head/Chair

Author:

Williams, Allison

Title:

Understanding RNA structure as a function of biological context, metabolites, and cellular influence

Graduate Program:

Biochemistry, Microbiology, and Molecular Biology (PHD)

Keywords:

G-quadruplex
Stress response
Archaea
Polyamines

File:

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Committee Members:

Paul Babitzke, Major Field Member
Scott Showalter, Major Field Member
Philip Bevilacqua, Chair & Dissertation Advisor
Wendy Hanna-Rose, Program Head/Chair
Sarah Assmann, Outside Field Member
Timothy Meredith, Outside Unit Member

Author:

Yuan, Zhenghao

Title:

Generation and Detection of Resonant High Harmonic Generation in Few-Layer Molybdenum Disulfide

Graduate Program:

Chemistry (MS)

Keywords:

High Harmonic Generation
Molybdenum Disulfide
Solid State

File:

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Committee Members:

Kenneth Luther Knappenberger, Jr., Thesis Advisor/Co-Advisor
John B Asbury, Committee Member
Philip Bevilacqua, Program Head/Chair
Lasse Jensen, Committee Member

Author:

Marak, Katherine

Title:

Surface Property Impacts on Heterogeneous Ice Nucleation of Engineered Materials

Graduate Program:

Chemistry (PHD)

Keywords:

aerosol chemistry
silica
silane
silver nanoparticles
thiosilver particles
ice nucleation
heterogeneous freezing
alumina
zeoilite
ZSM-5
air pollution
environmental chemistry

File:

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Committee Members:

Jerry Harrington, Outside Unit & Field Member
Christine Keating, Major Field Member
Miriam Freedman, Chair & Dissertation Advisor
Philip Bevilacqua, Program Head/Chair
Benjamin Lear, Major Field Member

Author:

Wickham, Laura

Title:

Nickel Catalyzed Dicarbofunctionalization of Alkenes with C(sp2) and C(sp3) Coupling Reagents

Graduate Program:

Chemistry (PHD)

Keywords:

organic chemistry
method development
dicarbofunctionalization
organometallic

File:

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Committee Members:

Philip Bevilacqua, Major Field Member
Philip Bevilacqua, Program Head/Chair
Ramesh Giri, Chair & Dissertation Advisor
Elizabeth Elacqua, Major Field Member
Bert Chandler, Outside Unit & Field Member

Author:

Zaniewski, Taylor

Title:

Chemomechanical Characterization of the Superprocessive Kinesin-3 KIF1A

Graduate Program:

Chemistry (PHD)

Keywords:

kinesin
enzyme kinetics
single molecule
biochemistry
biophysics

File:

Download Zaniewski_Dissertation_2022Aug29.pdf

Committee Members:

Paul Cremer, Major Field Member
William Hancock, Co-Chair & Dissertation Advisor
Melissa Rolls, Outside Unit & Field Member
Tae-Hee Lee, Major Field Member
Christine Keating, Co-Chair of Committee
Philip Bevilacqua, Program Head/Chair

Author:

Corrigan, Patrick

Title:

Oxygen Tolerance in the [FeFe] Hydrogenase from Clostridium beijerinckii CbHydA1

Graduate Program:

Chemistry (PHD)

Keywords:

Bioinorganic chemistry
hydrogenase

File:

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Committee Members:

Philip Bevilacqua, Program Head/Chair
Carsten Krebs, Major Field Member
Squire Booker, Major Field Member
Alexey Silakov, Chair & Dissertation Advisor
John Golbeck, Outside Unit & Field Member

Author:

Nova, Nabila Nabi

Title:

Study of nano and micro scale functional materials using high pressure and laser writing methods

Graduate Program:

Chemistry (PHD)

Keywords:

High pressure chemical vapor deposition
Direct laser writing
Nanoscale semiconductors
Graphitic carbon
Nanomaterials
Micropatterning

File:

Download NNNova_PhD_Dissertation.pdf

Committee Members:

Venkatraman Gopalan, Outside Unit & Field Member
Vincent Crespi, Major Field Member
Philip Bevilacqua, Program Head/Chair
John Asbury, Major Field Member
Lauren Zarzar, Chair & Dissertation Advisor

Author:

Piane, Jacob

Title:

New Catalytic Concepts for Electron-Transfer Promoted Reactions

Graduate Program:

Chemistry (PHD)

Keywords:

Catalysis
Electrochemistry
Electrocatalysis
Phenothiazine
Photoredox
Pyrylium
Dehydration
Single-Chain Polymer Nanoparticles
Electron Transfer
Acyl Substitution
Amidation
Oxidation
Dimerization
Esterification

File:

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Committee Members:

Elizabeth Elacqua, Co-Chair & Dissertation Advisor
Eric Nacsa, Co-Chair & Dissertation Advisor
Christian Pester, Outside Unit & Field Member
Raymond Schaak, Major Field Member
Philip Bevilacqua, Program Head/Chair
Jonathan Kuo, Major Field Member

Author:

Winston, Dennis Sean

Title:

Investigating the Role of Conformational Dynamics in Allosteric Regulation

Graduate Program:

Chemistry (PHD)

Keywords:

Allostery
Conformational Dynamics
Poliovirus
Chorismate Mutase
Protein NMR

File:

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Committee Members:

David Boehr, Chair & Dissertation Advisor
Scott Showalter, Major Field Member
Philip Bevilacqua, Major Field Member
Joyce Jose, Outside Unit & Field Member
Philip Bevilacqua, Program Head/Chair

Author:

Rios, Kelly

Title:

The regulation of gene expression during Plasmodium yoelii host-to-vector transmission

Graduate Program:

Biochemistry, Microbiology, and Molecular Biology (PHD)

Keywords:

malaria
translational repression
parasitology
Plasmodium yoelii

File:

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Committee Members:

Sarah Assmann, Outside Unit Member
Scott Lindner, Chair & Dissertation Advisor
Manuel Llinas, Major Field Member
Philip Bevilacqua, Major Field Member
Joyce Jose, Outside Field Member
Ken Keiler, Program Head/Chair

Author:

Schulze, Jessica

Title:

Investigation of organic materials in electrolyte solutions using reactive molecular dynamics with applications in hydrogels, cryo-EM, and planetary science

Graduate Program:

Chemistry (PHD)

Keywords:

ReaxFF
MD
poly(vinyl alcohol)
Enceladus
cryo-EM
mechanical properties
water-electrolyte
computations
chemistry

File:

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Committee Members:

C Okafor, Major Field Member
Susan Sinnott, Major & Minor Field Member
Susan Hafenstein, Outside Unit & Field Member
Adri van Duin, Chair, Minor Member & Dissertation Advisor
Philip Bevilacqua, Program Head/Chair

Author:

Munro, Justin

Title:

Acetyl-CoA Production Inside and Outside of the Mitochondrion is Essential for Plasmodium falciparum During Asexual Red Blood Cell and Sexual Stage Development

Graduate Program:

Chemistry (PHD)

Keywords:

Plasmodium falciparum
Acetyl-CoA
Malaria
Metabolomics
HPLC/MS

File:

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Committee Members:

Andrew Patterson, Outside Unit & Field Member
Scott Showalter, Major Field Member
Manuel Llinas, Chair & Dissertation Advisor
Philip Bevilacqua, Major Field Member
Philip Bevilacqua, Program Head/Chair

Author:

Balaj, Rebecca

Title:

Understanding interfacial transport, reactions, and phase behavior in emulsion systems

Graduate Program:

Chemistry (PHD)

Keywords:

Emulsions
Phase separation
Capsules
Alginate
Solubilization
Droplets
Complex droplets
Reconfiguration
Surfactants
Surfactant partitioning
Complex fluids
Liquid interfaces
Droplet stability
Polyelectrolyte capsule
Reactions in droplets
Reactions at fluid interfaces
Reconfigurable droplets

File:

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Committee Members:

Paul Cremer, Major Field Member
Christine Keating, Major Field Member
Igor Aronson, Outside Unit & Field Member
Lauren Zarzar, Chair & Dissertation Advisor
Philip Bevilacqua, Program Head/Chair

Author:

Krist, Kathleen

Title:

Understanding the Thermodynamic Driving Forces for Nanoscale Chemotaxis

Graduate Program:

Chemistry (PHD)

Keywords:

Nanoscale chemotaxis
Irreversible thermodynamics
Catalytic motors
Onsager-Machlup Theory
Gradient flows
McMillan-Mayer Theory

File:

Download Krist_Dissertation.pdf

Committee Members:

Paul Cremer, Major Field Member
William Noid, Chair & Dissertation Advisor
Igor Aronson, Outside Unit & Field Member
Ayusman Sen, Major Field Member
Philip Bevilacqua, Program Head/Chair

Author:

Greenberger, Virginia

Title:

Microfluidic Monitoring of Copper Ion Binding to and Oxidation of Phospholipid Bilayers

Graduate Program:

Chemistry (PHD)

Keywords:

Microfluidics
Lipid Bilayers
Transition Metals
Oxidation
Copper
Chemistry
Fluorescence

File:

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Committee Members:

Paul Cremer, Chair & Dissertation Advisor
David Boehr, Major Field Member
Tae-Hee Lee, Major Field Member
Joyce Jose, Outside Unit & Field Member
Philip Bevilacqua, Program Head/Chair

Author:

Mandalaparthy, Varun

Title:

The Influence of Cosolvent Interactions Upon Interfaces and Macromolecules

Graduate Program:

Chemistry (PHD)

Keywords:

protein stability
polymers
proteins
osmolytes
thermodynamics
statistical mechanics
lattice models
protein folding
urea
tmao
simulations
theory
solute interactions
molecular dynamics
monte carlo

File:

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Committee Members:

Paul Cremer, Major Field Member
William Noid, Chair & Dissertation Advisor
Edward O'Brien, Major Field Member
Xiantao Li, Outside Unit & Field Member
Philip Bevilacqua, Program Head/Chair

Author:

Steves, Megan

Title:

Elucidating the Interplay of Optical Function and Structure in Nanomaterials with Nonlinear Optical Microscopy

Graduate Program:

Chemistry (PHD)

Keywords:

2D materials
nonlinear optics
ultrafast spectroscopy
2d metals
transition metal dichalcogenides
second harmonic generation
microscopy

File:

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Committee Members:

Mauricio Terrones, Outside Unit & Field Member
Lasse Jensen, Major Field Member
Kenneth Knappenberger, Chair & Dissertation Advisor
John Asbury, Major Field Member
Philip Bevilacqua, Program Head/Chair

Author:

Wenger, Eliott

Title:

Mechanistic Investigation of Oxygen-Activating Enzymes Using Rapid-Kinetics, Structural, and Spectroscopic Methodologies

Graduate Program:

Chemistry (PHD)

Keywords:

Enzyme
Mechanism
Oxygen
Kinetics
Crystallography
Metalloenzyme
Stopped-flow
EPR-spectroscopy
Mossbauer-spectroscopy
Mass Spectrometry

File:

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Committee Members:

Howard Salis, Outside Unit & Field Member
Amie Boal, Major Field Member
Carsten Krebs, Co-Chair of Committee
Alexey Silakov, Major Field Member
Joseph Bollinger, Co-Chair & Dissertation Advisor
Philip Bevilacqua, Program Head/Chair