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Author:

Behrens, Christopher Michael

Title:

Optimal design and operation of complex materials processing with application to microelectronics

Graduate Program:

Chemical Engineering

Keywords:

multiscale methods
optimization
complex materials processing
computational efficiency

File:

Download Thesis_Final4.pdf

Committee Members:

Antonios Armaou, Thesis Advisor/Co-Advisor
Antonios Armaou, Thesis Advisor/Co-Advisor

Author:

Moore, Gregory Lee

Title:

Modeling and Optimization in Directed Evolution Protocols and Protein Engineering

Graduate Program:

Chemical Engineering

Keywords:

directed evolution
protein engineering
optimization

File:

Download thesis.pdf

Committee Members:

Costas D Maranas, Committee Chair/Co-Chair
Ali Borhan, Committee Member
Patrick Cirino, Committee Member
Stephen James Benkovic, Committee Member
Andrew Zydney, Committee Member

Author:

Saraf, Manish Chandra

Title:

DEVELOPMENT OF COMPUTATIONAL TOOLS FOR THE DESIGN AND OPTIMIZATION OF COMBINATORIAL PROTEIN LIBRARIES

Graduate Program:

Chemical Engineering

Keywords:

protein engineering
directed evolution
bioinformatics
protein library design
optimization

File:

Download Thesis.pdf

Committee Members:

Michael Pishko, Committee Member
Patrick Cirino, Committee Member
Stephen James Benkovic, Committee Member
Andrew Zydney, Committee Member
Costas D Maranas, Committee Chair/Co-Chair

Author:

Farasat, Iman

Title:

Sequence-to-function models for efficient optimization of metabolic pathways and genetic circuits

Graduate Program:

Chemical Engineering

Keywords:

metabolic pathway
genetic circuit
CRISPR
Cas9
modeling
combinatorial optimization
protein expression
optimization

File:

Download Farasat_PhD_dissertation.pdfDownload 1-Farasat_PhD_dissertation.pdf

Committee Members:

Howard M Salis, Dissertation Advisor/Co-Advisor
Howard M Salis, Committee Chair/Co-Chair
Ali Borhan, Committee Member
Timothy Charles Meredith, Committee Member
Costas D Maranas, Committee Member

Author:

Fang, Yizhou

Title:

Model-based Receding Horizon Control and Estimation for Nonlinear Systems via Carleman Approximation

Graduate Program:

Chemical Engineering

Keywords:

model predictive control
moving horizon estimation
nonlinear control
Carleman approximation
computational efficiency
advanced process control
optimization

File:

Download Final_Dissertation.pdf

Committee Members:

Antonios Armaou, Dissertation Advisor/Co-Advisor
Antonios Armaou, Committee Chair/Co-Chair
Robert Martin Rioux Jr., Committee Member
Xueyi Zhang, Committee Member
Hosam Kadry Fathy, Outside Member