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Author:

Woo, Yong

Title:

Optimization and Statistical Estimation for the Post Randomization Method

Graduate Program:

Statistics

Keywords:

Post Randomization Method
Statistical Disclosure Control
EM Algorithm
Generalized Linear Models
Constrained Optimization

File:

Download jwoo_dissertation_final.pdf

Committee Members:

Aleksandra B Slavkovic, Dissertation Advisor/Co-Advisor
Donald Richards, Dissertation Advisor/Co-Advisor
Naomi S Altman, Committee Member
Stephanie Trea Lanza, Committee Member

Author:

Ma, Zhaorong

Title:

Functional and Evolutionary Genomics of Plant Small RNAs

Graduate Program:

Integrative Biosciences

Keywords:

genomics
small RNAs
microRNAs
comparative genomics
evolutionary genomics
targeted enrichment
targeted genomic enrichment

File:

Download Zhaorong_Ma_final_dissertation.pdf

Committee Members:

Michael Axtell, Dissertation Advisor/Co-Advisor
Michael Axtell, Committee Chair/Co-Chair
Claude Walker Depamphilis, Committee Member
Naomi S Altman, Committee Member
Ross Cameron Hardison, Committee Member

Author:

Wang, Qingyu

Title:

Evaluating Multiple Sequence Alignments Using ENCODE Data

Graduate Program:

Integrative Biosciences

Keywords:

Multiple Sequence Alignment
Motif-based evaluation
ENCODE
ChIP-seq

File:

Download QWFinal_thesis.pdf

Committee Members:

Webb Colby Miller, Thesis Advisor/Co-Advisor
Ross Cameron Hardison, Thesis Advisor/Co-Advisor
Naomi S Altman, Thesis Advisor/Co-Advisor

Author:

Zhang, Yeting

Title:

Horizontal Gene Transfer Studies in Parasitic Plants of the Orobanchaceae

Graduate Program:

Genetics

Keywords:

Horizontal gene transfer
Parasitic plants
Orobanchaceae

File:

Download yetingDissertationOri.pdf

Committee Members:

Claude W De Pamphilis, Dissertation Advisor/Co-Advisor
Stephen Wade Schaeffer, Committee Chair/Co-Chair
Tomas Carlo, Committee Member
Naomi S Altman, Committee Member
John Edward Carlson, Committee Member

Author:

Honaas, Loren Axel

Title:

Tissue specific de novo transcriptomics in the parasitic Orobanchaceae

Graduate Program:

Plant Biology

Keywords:

Orobanchaceae
Laser Microdissection
Expansin
RNA Seq
Illumina
Triphysaria
Orobanche
Striga
de novo assembly

File:

Download Loren_Honaas_dissertation.pdfDownload Appendices.zip

Committee Members:

Claude Walker Depamphilis, Dissertation Advisor/Co-Advisor
Daniel J Cosgrove, Committee Member
Gabriele Brigitte Monshausen, Committee Member
Dawn S Luthe, Special Member
Naomi S Altman, Special Member

Author:

Austin, Stefanie Rose

Title:

Multiple Hypothesis Testing of Discrete Data

Graduate Program:

Statistics

Keywords:

statistics
hypothesis testing
multiple testing
false discovery rate
FDR
discrete
benjamini and hochberg
null hypotheses

File:

Download Austin_Stefanie_Master_Thesis_final.pdf

Committee Members:

Naomi S Altman, Thesis Advisor/Co-Advisor

Author:

Luo, Wei

Title:

Efficient estimation and order determination for sufficient dimension reduction

Graduate Program:

Statistics

Keywords:

dimension reduction
order-determination
bootstrap
augmentation
semi-parametric
efficient estimation.

File:

Download dissertation_-_Wei_Luo.pdf

Committee Members:

Bing Li, Dissertation Advisor/Co-Advisor
Bing Li, Committee Chair/Co-Chair
Runze Li, Committee Member
Naomi S Altman, Committee Member
Jesse Louis Barlow, Committee Member

Author:

Xiang, Jie

Title:

REGULATION OF STRESS ERYTHROPOIESIS: INTERACTION BETWEEN MICROENVIRONMENT AND STRESS ERYTHROID PROGENITORS

Graduate Program:

Integrative Biosciences

Keywords:

Stress erythropoiesis
Stem cell
Epo
progenitors
Anemia

File:

Download Jie_Xiang-Phd_Thesis-_final_updated.pdf

Committee Members:

Robert Paulson, Dissertation Advisor/Co-Advisor
Robert Paulson, Committee Chair/Co-Chair
Ross Cameron Hardison, Committee Member
Zhi Chun Lai, Committee Member
Kumble Sandeep Prabhu, Committee Member
Yanming Wang, Committee Member
Naomi S Altman, Committee Member

Author:

YANG , HANYU

Title:

Statistical Models for Scalar Response with Longitudinal Covariates

Graduate Program:

Statistics

Keywords:

longitudinal study
functional data
nonparametric regression
measurement error
generalized linear model
zero-inflated count

File:

Download HanyuYang-Dissertation.pdf

Committee Members:

Runze Li, Dissertation Advisor/Co-Advisor
Runze Li, Committee Chair/Co-Chair
Naomi S Altman, Committee Member
Zhibiao Zhao, Committee Member
Stephanie Trea Lanza, Committee Member

Author:

Huang, Yuan

Title:

Projection Test for High-dimensional Mean Vectors with Optimal Direction

Graduate Program:

Statistics

Keywords:

High-dimensional data
Hotelling's T2 test
Projection test
One-sample problem
Two-sample problem

File:

Download YuanHuang_FinalVersion.pdf

Committee Members:

Runze Li, Dissertation Advisor/Co-Advisor
Runze Li, Committee Chair/Co-Chair
David Russell Hunter, Committee Member
Naomi S Altman, Committee Member
Lan Kong, Committee Member
Aleksandra B Slavkovic, Committee Member