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Start Over Graduate Program Computer Science and Engineering Year 2009

1. PFFTC: An Improved Fast Fourier Transform for the IBM Cell Broadband Engine

open_access
Open Access
Author:
Shaffer, Andrew Paul
Title:
PFFTC: An Improved Fast Fourier Transform for the IBM Cell Broadband Engine
Graduate Program:
Computer Science and Engineering
Keywords:
Cell Broadband Engine
High Performance Computing
Fast Fourier Transform
File:
Download PFFTC_An_Improved_Fast_Fourier_Transform_for_the_IBM_Cell_Broadband_Engine.pdf
Committee Members:
Padma Raghavan, Thesis Advisor/Co-Advisor
Padma Raghavan, Thesis Advisor/Co-Advisor

2. BDI Plan Update In Dynamic Environments

open_access
Open Access
Author:
Fecteau, Anthony Roman
Title:
BDI Plan Update In Dynamic Environments
Graduate Program:
Computer Science and Engineering
Keywords:
plan abort
plan fail
plan update
multi agent systems
intelligent agents
artificial intelligence
r-cast
BDI
plan task execution
plan step execution
update dispatcher
File:
Download anthonyfecteau.pdf
Committee Members:
John Yen, Thesis Advisor/Co-Advisor
Tracy Mullen, Thesis Advisor/Co-Advisor
Wang Chien Lee, Thesis Advisor/Co-Advisor

4. ASSEMBLY ALGORITHMS FOR NEXT GENERATION SEQUENCE DATA

open_access
Open Access
Author:
Ratan, Aakrosh
Title:
ASSEMBLY ALGORITHMS FOR NEXT GENERATION SEQUENCE DATA
Graduate Program:
Computer Science and Engineering
Keywords:
next-generation sequencing
genome assembly
algorithms
File:
Download dissertation.pdf
Committee Members:
Webb Colby Miller, Dissertation Advisor/Co-Advisor
Webb Colby Miller, Committee Chair/Co-Chair
Piotr Berman, Committee Member
Stephan Schuster, Committee Member
Raj Acharya, Committee Member

5. Comprehensive Spatial Query Containment Framework for Minimizing Redundancy

open_access
Open Access
Author:
Unger, Brandon Michael
Title:
Comprehensive Spatial Query Containment Framework for Minimizing Redundancy
Graduate Program:
Computer Science and Engineering
Keywords:
region query
database
data management
containment framework
auxiliary scope
containment scope
spatial query
nearest neighbor query
reverse nearest neighbor query
File:
Download thesisbunger.pdf
Committee Members:
Wang Chien Lee, Thesis Advisor/Co-Advisor
Wang Chien Lee, Thesis Advisor/Co-Advisor
John Joseph Hannan, Thesis Advisor/Co-Advisor
Daniel Kifer, Thesis Advisor/Co-Advisor

6. MINING, INDEXING, AND SEARCH APPROACHES TO ENTITY AND GRAPH INFORMATION RETRIEVAL FOR CHEMOINFORMATICS

open_access
Open Access
Author:
Sun, Bingjun
Title:
MINING, INDEXING, AND SEARCH APPROACHES TO ENTITY AND GRAPH INFORMATION RETRIEVAL FOR CHEMOINFORMATICS
Graduate Program:
Computer Science and Engineering
Keywords:
Information retrieval
information extraction
entity tagging
entity search
query model
graph mining
graph indexing
graph search
feature selection
Chemoinformatics
File:
Download BingjunSun-Dissertation.pdf
Committee Members:
C Lee Giles, Committee Chair/Co-Chair
Prasenjit Mitra, Committee Chair/Co-Chair
Jesse Louis Barlow, Committee Member
Robert T Collins, Committee Member
Bing Li, Committee Member

7. Computational pipeline for the empirical detection of cleaved targets of small silencing RNAs using degradome sequencing data

open_access
Open Access
Author:
Addo-Quaye, Charles
Title:
Computational pipeline for the empirical detection of cleaved targets of small silencing RNAs using degradome sequencing data
Graduate Program:
Computer Science and Engineering
Keywords:
small RNAs microRNAs
File:
Download CAA154.pdf
Committee Members:
Webb Colby Miller, Dissertation Advisor/Co-Advisor
Webb Colby Miller, Committee Chair/Co-Chair
Michael Axtell, Committee Chair/Co-Chair
Ali Hurson, Committee Member
Raj Acharya, Committee Member
Padma Raghavan, Committee Member
John Edward Carlson, Committee Member

8. Port Authority: Integrity Verification Through Connection Management

open_access
Open Access
Author:
Shal, Christopher George
Title:
Port Authority: Integrity Verification Through Connection Management
Graduate Program:
Computer Science and Engineering
Keywords:
networking
network management
integrity measurement
integrity verification
connection management
File:
Download shal-ms.pdf
Committee Members:
Trent Ray Jaeger, Thesis Advisor/Co-Advisor
Trent Ray Jaeger, Thesis Advisor/Co-Advisor
Patrick Drew Mcdaniel, Thesis Advisor/Co-Advisor

9. INFERENCE OF ORTHOLOGS, WHILE CONSIDERING GENE CONVERSION, TO EVALUATE WHOLE-GENOME MULTIPLE SEQUENCE ALIGNMENTS

open_access
Open Access
Author:
Hsu, Chih-Hao
Title:
INFERENCE OF ORTHOLOGS, WHILE CONSIDERING GENE CONVERSION, TO EVALUATE WHOLE-GENOME MULTIPLE SEQUENCE ALIGNMENTS
Graduate Program:
Computer Science and Engineering
Keywords:
Evolution
Gene conversion
Orthology
Multiple-Sequence Alignment
File:
Download Dissertation.pdf
Committee Members:
Webb Colby Miller, Dissertation Advisor/Co-Advisor
Webb Colby Miller, Committee Chair/Co-Chair
Raj Acharya, Committee Member
Wang Chien Lee, Committee Member
Ross Cameron Hardison, Committee Member