1. LEARNING SIGNALS IN GENOMIC SEQUENCE ALIGNMENTS FOR IDENTIFICATION OF FUNCTIONAL ELEMENTS Open Access Author: Taylor, James Title: LEARNING SIGNALS IN GENOMIC SEQUENCE ALIGNMENTS FOR IDENTIFICATION OF FUNCTIONAL ELEMENTS Graduate Program: Computer Science and Engineering Keywords: functional element predictionmultiple sequence alignmentphylogenyMarkov Models File: Download James-Dissertation.pdf Committee Members: Webb Colby Miller, Committee Chair/Co-ChairFrancesca Chiaromonte, Committee MemberRoss Cameron Hardison, Committee MemberHongyuan Zha, Committee MemberPiotr Berman, Committee Member