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Author:

Saunders, Allison Hoover

Title:

Investigation of the Structure, Function, and Regulation of Quinolinate Synthase: the Iron-Sulfur Cluster Enzyme Involved in Prokaryotic NAD+ Biosynthesis

Graduate Program:

Biochemistry, Microbiology, and Molecular Biology

Keywords:

NadA
iron-sulfur cluster
NAD
enzyme

File:

Download Saunders_Thesis.pdf

Committee Members:

Squire J Booker, Dissertation Advisor/Co-Advisor
Squire J Booker, Committee Chair/Co-Chair
Joseph M Bollinger Jr., Committee Member
Carsten Krebs, Committee Member
Ming Tien, Committee Member
Philip C. Bevilacqua, Committee Member

Author:

Agarwal, Pratul K.

Title:

Quantum Effects and Protein Motion in Enzymatic Catalysis

Graduate Program:

Chemistry

Keywords:

ring puckering
protein
enzyme
quantum effects
coupled motion
network of motions
network
vibrations
reaction coordinate

File:

Download pka.pdf

Committee Members:

Kenneth M Merz Jr, Committee Member
Sharon Hammes Schiffer, Committee Chair/Co-Chair
Stephen James Benkovic, Committee Member
Milton Walter Cole, Committee Member

Author:

Chen, Qin

Title:

ENSILING CORN STOVER WITH ENZYMES AS A FEEDSTOCK PRESERVATION METHOD FOR BIOCONVERSION

Graduate Program:

Agricultural and Biological Engineering

Keywords:

corn stover
enzyme
laccase
ensilage
harvest date
lignin depolymerization
pretreatment
bioconversion
modeling.

File:

Download Qin-dissertation.pdf

Committee Members:

Thomas Lehman Richard, Dissertation Advisor/Co-Advisor
Thomas Lehman Richard, Committee Chair/Co-Chair
Ali Demirci, Committee Member
Ming Tien, Committee Member
James Landis Rosenberger, Committee Member
Corey W Radtke, Committee Member

Author:

Kim, Se-Hwa

Title:

Nanobiosensors for oxidative stress and their applications

Graduate Program:

Integrative Biosciences

Keywords:

biosensor
cell-based
enzyme
polymer
oxidative stress

File:

Download KimSH_PhD_Thesis.pdf

Committee Members:

Michael V Pishko, Committee Chair/Co-Chair
Cara Lynne Schengrund, Committee Member
Ahmed A Heikal, Committee Member
Peter J Butler, Committee Member
Peter John Hudson, Committee Member

Author:

Sengupta, Samudra

Title:

Enzyme Molecules as Nanomotors and Micropumps

Graduate Program:

Chemistry

Keywords:

enzyme
single-molecule
diffusion
nanomotor
chemotaxis
micropump

File:

Download 1-PhD_Dissertation_Samudra_Sengupta.pdf

Committee Members:

Ayusman Sen, Dissertation Advisor/Co-Advisor
Thomas E Mallouk, Committee Member
John V Badding, Committee Member
Peter J Butler, Special Member

Author:

Rajakovich, Lauren Julia

Title:

Exploring the functional and mechanistic diversity of diiron oxidases and oxygenases

Graduate Program:

Biochemistry, Microbiology, and Molecular Biology

Keywords:

enzyme
iron oxygenase
gene annotation
organophosphonate
HD-domain
biofuel
alkane
ferritin-like
diiron
peroxyl radical
PetF
alkene

File:

Download Dissertation_RajakovichLJ.pdf

Committee Members:

Joseph M Bollinger Jr., Dissertation Advisor/Co-Advisor
Carsten Krebs, Committee Chair/Co-Chair
Squire J Booker, Committee Member
Amie Kathleen Boal, Committee Member
Christopher Howard House, Outside Member

Author:

O'Rourke, Kathleen Faye

Title:

CONFORMATIONAL DYNAMICS AND LONG-RANGE INTERACTIONS IN TRYPTOPHAN BIOSYNTHETIC ENZYMES

Graduate Program:

Chemistry

Keywords:

tryptophan synthase
indole-3-glycerol phosphate synthase
enzyme
conformational dynamics
long-range interactions

File:

Download KFO_dissertation_final.pdf

Committee Members:

David D Boehr, Dissertation Advisor/Co-Advisor
David D Boehr, Committee Chair/Co-Chair
Philip C. Bevilacqua, Committee Member
Joseph M Bollinger Jr., Committee Member
John H Golbeck, Outside Member

Author:

Blaszczyk, Anthony J

Title:

IN VITRO STUDIES OF CLASS B METHYLASES, AN ELUSIVE CLASS OF COBALAMIN-DEPENDENT RADICAL SAM ENZYMES

Graduate Program:

Biochemistry, Microbiology, and Molecular Biology

Keywords:

enzyme
cobalamin
s-adenosylmethionine
radical sam
protein purification
biochemistry
mechanistic enzymology
methylation
Class B methylase
TsrM
Fom3
PhpK

File:

Download Thesis_Blaszczyk_Final_II.docx.pdf

Committee Members:

Squire J Booker, Dissertation Advisor/Co-Advisor
Squire J Booker, Committee Chair/Co-Chair
Carsten Krebs, Committee Member
Joseph M Bollinger Jr., Committee Member
William O Hancock, Outside Member
Amie Kathleen Boal, Committee Member

Author:

Potter, Jacob

Title:

Studying the Structure and Interactions of the Globin-Coupled Sensor in P. carotovorum

Graduate Program:

Biochemistry, Microbiology, and Molecular Biology (PHD)

Keywords:

Biochemistry
Microbiology
Molecular Biology
SAXS
Pectobacterium
PccGCS
Diguanylate cyclase
c-di-GMP
cryo-EM
globin
globin coupled sensor
oxygen sensing
structural biology
enzyme
oligomer
domain
signal transduction
bacteria
virulence
cross linking
spectroscopy

File:

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Committee Members:

Lorraine Santy, Major Field Member
Scott Showalter, Outside Unit & Field Member
Timothy Miyashiro, Major Field Member
Timothy Meredith, Major Field Member
Wendy Hanna-Rose, Program Head/Chair
Emily Weinert, Chair & Dissertation Advisor

Author:

Knox, Hayley

Title:

Structural characterization of class B methylases, an elusive subset of cobalamin-dependent radical SAM enzymes

Graduate Program:

Chemistry (PHD)

Keywords:

radical SAM
cobalamin
vitamin B12
S-adenosylmethionine
enzyme
methylation

File:

Download HLK_Thesis_Final.pdf

Committee Members:

Ken Keiler, Outside Unit & Field Member
Amie Boal, Major Field Member
Carsten Krebs, Major Field Member
Squire Booker, Chair & Dissertation Advisor
Philip Bevilacqua, Program Head/Chair