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Open Access

Author:: Qiu, Yijun
Title:: Identification of Regions in Drosophila Spt5 That Are Involved in Promoter Proximal Pausing
Graduate Program:: Biochemistry, Microbiology, and Molecular Biology
Keywords:: transcription elongation
RNA polymerase II
promoter proximal pausing
Spt5
KOW domain
gene regulation
File:: Download Yijun_Qiu_Thesis_final.pdf
Committee Members:: David Scott Gilmour, Dissertation Advisor/Co-Advisor
David Scott Gilmour, Committee Chair/Co-Chair
Joseph C. Reese, Committee Member
Benjamin Franklin Pugh, Committee Member
Philip C. Bevilacqua, Outside Member
Song Tan, Committee Member

Open Access

Author:: Boehm, Sarah Jane
Title:: Electric Field Directed Nanowire Assembly: Towards Reconfigurable Materials with Switchable Properties
Graduate Program:: Chemistry
Keywords:: gold
silica
dielectrophoresis
metamaterial
electrohydrodynamics
polarizer
lattice
File:: Download S_J_Boehm_Chemistry_Dissertation_2017.pdf
Committee Members:: Christine D. Keating, Dissertation Advisor/Co-Advisor
Christine D. Keating, Committee Chair/Co-Chair
Philip C. Bevilacqua, Committee Member
Paul S. Cremer, Committee Member
Douglas H. Wener, Outside Member

Open Access

Author:: Gibbs, Eric Bryant
Title:: THE EFFECTS OF MULTI-SITE PHOSPHORYLATION ON THE STRUCTURE AND FUNCTION OF THE CARBOXYL-TERMINAL DOMAIN OF THE RNA POLYMERASE II LARGE SUBUNIT
Graduate Program:: Chemistry
Keywords:: IDP
RNAPII
CTD
Intrinsically Disordered Protein
NMR
SAXS
P-TEFb
Ssu72
File:: Download Eric_Bryant_Gibbs_Final_Dissertation.pdf
Committee Members:: Scott A. Showalter, Dissertation Advisor/Co-Advisor
Scott A. Showalter, Committee Chair/Co-Chair
Philip C. Bevilacqua, Committee Member
William G. Noid, Committee Member
David Gilmour, Outside Member

Open Access

Author:: Popczun, Nicholas James
Title:: FUNDAMENTAL STUDIES OF MOLECULAR SECONDARY ION MASS SPECTROMETRY IONIZATION PROBABILITY MEASURED WITH FEMTOSECOND, INFRARED LASER POST-IONIZATION
Graduate Program:: Chemistry
Keywords:: secondary ion mass spectrometry
secondary neutral mass spectrometry
mass spectrometry
time-of-flight
ionization
laser post-ionization
femtosecond
organic
surface science
ionization probability
File:: Download Final_Dissertation_NJPopczun_.pdf
Committee Members:: Nicholas Winograd, Dissertation Advisor/Co-Advisor
Nicholas Winograd, Committee Chair/Co-Chair
Barbara Jane Garrison, Committee Member
Philip C. Bevilacqua, Committee Member
Themis Matsoukas, Outside Member

Open Access

Author:: Mitchell, Andrew James
Title:: Structural Basis for Alternative Reaction Outcome by the Iron- and 2-oxoglutarate-dependent Oxygenases
Graduate Program:: Biochemistry, Microbiology, and Molecular Biology
Keywords:: metalloenzymes
x-ray crystallography
halogenation
Fe/2OG oxygenases
File:: Download mitchell_disserataion_2017.pdf
Committee Members:: Amie K. Boal, Dissertation Advisor/Co-Advisor
Wendy Hanna-Rose, Committee Chair/Co-Chair
Carsten Krebs, Committee Member
Joseph M Bollinger Jr., Committee Member
Philip C. Bevilacqua, Outside Member
Squire J Booker, Committee Member
Benjamin D Allen, Special Member

Open Access

Author:: Frankel, Erica Ann
Title:: Towards Investigation of RNA Catalysis and Compartmentalization
Graduate Program:: Chemistry
Keywords:: RNA
Catalysis
Compartmentalization
Cooperativity
Origins of Life
File:: Download Frankel_Dissertation_Final.pdf
Committee Members:: Philip C. Bevilacqua, Dissertation Advisor/Co-Advisor
Philip C. Bevilacqua, Committee Chair/Co-Chair
Scott A Showalter, Committee Member
Amie Kathleen Boal, Committee Member
James Kasting, Outside Member
Christine Dolan Keating, Dissertation Advisor/Co-Advisor
Christine Dolan Keating, Committee Chair/Co-Chair

Open Access

Author:: O'Rourke, Kathleen Faye
Title:: CONFORMATIONAL DYNAMICS AND LONG-RANGE INTERACTIONS IN TRYPTOPHAN BIOSYNTHETIC ENZYMES
Graduate Program:: Chemistry
Keywords:: tryptophan synthase
indole-3-glycerol phosphate synthase
enzyme
conformational dynamics
long-range interactions
File:: Download KFO_dissertation_final.pdf
Committee Members:: David D Boehr, Dissertation Advisor/Co-Advisor
David D Boehr, Committee Chair/Co-Chair
Philip C. Bevilacqua, Committee Member
Joseph M Bollinger Jr., Committee Member
John H Golbeck, Outside Member

Open Access

Author:: Bingaman, Jamie Lee
Title:: Identification of novel catalytic strategies of small ribozymes
Graduate Program:: Chemistry
Keywords:: ribozyme
glmS
RNA
catalysis
File:: Download Bingaman_dissertation_2017.pdf
Committee Members:: Philip C. Bevilacqua, Dissertation Advisor/Co-Advisor
Philip C. Bevilacqua, Committee Chair/Co-Chair
Squire J Booker, Committee Member
David D Boehr, Committee Member
Song Tan, Outside Member

Open Access

Author:: Shahid, Saima
Title:: Discovery of endogenous plant small RNAs and their role in trans-species gene regulation
Graduate Program:: Plant Biology
Keywords:: miRNA
siRNA
plant small RNAs
Amborella
Physcomitrella
Triphysaria
Cuscuta
Parasitic plants
trans-species gene regulation
File:: Download Dissertation_Saima_Shahid_final_111717.pdf
Committee Members:: Michael Axtell, Dissertation Advisor/Co-Advisor
Michael Axtell, Committee Chair/Co-Chair
Claude Walker Depamphilis, Committee Member
Gabriele Brigitte Monshausen, Committee Member
Philip C. Bevilacqua, Outside Member

Restricted

Author:: Tang, Yin
Title:: HIDDEN RNA CODES REVEALED FROM THE PLANT IN VIVO RNA STRUCTUROME
Graduate Program:: Integrative Biosciences
Keywords:: RNA structure
Arabidopsis thaliana
oryza sativa
high-throughput sequencing
File:: No files available due to restrictions.
Committee Members:: Sarah M. Assmann, Dissertation Advisor/Co-Advisor
Sarah M. Assmann, Committee Chair/Co-Chair
Philip C. Bevilacqua, Committee Member
Anton Nekrutenko, Committee Member
Yu Zhang, Outside Member

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