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Open Access

Author:: Missra, Anamika
Title:: BIOCHEMICAL ANALYSIS OF INTERACTIONS OF DSIF AND NELF WITH THE DROSOPHILA RNA POLYMERASE II TRANSCRIPTION ELONGATION COMPLEX
Graduate Program:: Biochemistry, Microbiology, and Molecular Biology
Keywords:: gene regulation
transcription
polymerase
File:: Download Anamika_Missra_Dissertation_Final.pdf
Committee Members:: David Scott Gilmour, Dissertation Advisor/Co-Advisor
David Scott Gilmour, Committee Chair/Co-Chair
Joseph C. Reese, Committee Member
Katsuhiko Murakami, Committee Member
Yanming Wang, Committee Member
Kyung An Han, Committee Member

Open Access

Author:: Venters, Bryan Jacob
Title:: HIGH-RESOLUTION GENOME-WIDE ORGANIZATION OF THE YEAST TRANSCRIPTION MACHINERY
Graduate Program:: Biochemistry, Microbiology, and Molecular Biology
Keywords:: ChIP-chip
Tiling microarrays
Pre-initiation complex
Chromatin
Saccharomyces
Mot1
File:: Download 080724_Venters_Thesis.pdf
Committee Members:: Benjamin Franklin Pugh, Committee Chair/Co-Chair
Joseph C. Reese, Committee Member
Ross Cameron Hardison, Committee Member
David Scott Gilmour, Committee Member
Naomi S Altman, Committee Member

Open Access

Author:: Lee, Chanhyo
Title:: GENOME-WIDE ANALYSIS OF NELF: NELF IS LINKED TO PROMOTER PROXIMAL PAUSING THROUGHOUT THE DROSOPHILA GENOME
Graduate Program:: Biochemistry, Microbiology, and Molecular Biology
Keywords:: elongation
transcription
promoter proximal pausing
NELF
GAGA factor
RNA polymerase II
File:: Download ChanhyoLee_dissertation.pdf
Committee Members:: David Scott Gilmour, Committee Chair/Co-Chair
Benjamin Franklin Pugh, Committee Member
Joseph C. Reese, Committee Member
B Tracy Nixon, Committee Member
Pamela Hankey Giblin, Committee Member
Andrew Thomas Henderson, Committee Member
Richard John Frisque, Committee Member

Open Access

Author:: Manna, David P
Title:: Investigation of the Role of Nonstructural 4B Protein in Hepatitis C Virus Replication Complex Formation and Infectious Virus Production
Graduate Program:: Biochemistry, Microbiology, and Molecular Biology
Keywords:: Replication
NS4B
Hepatitis C Virus
Virus production
File:: Download David_Manna_Dissertation_11-17-11.pdf
Committee Members:: Kouacou Konan, Dissertation Advisor/Co-Advisor
Kouacou Konan, Committee Chair/Co-Chair
Craig Eugene Cameron, Committee Member
Avery August, Committee Member
Joseph C. Reese, Committee Member
Anthony Paul Schmitt, Committee Member

Open Access

Author:: Sermwittayawong, Decha
Title:: MECHANISMS OF THE SAGA COACTIVATOR COMPLEX IN REGULATION OF GENE TRANSCRIPTION
Graduate Program:: Biochemistry, Microbiology, and Molecular Biology
Keywords:: Gcn5
competition
Spt3
TBP
Spt8
SAGA
bromodomain
File:: Download ThesisMaster_071906c.pdf
Committee Members:: Song Tan, Committee Chair/Co-Chair
Jerry L Workman, Committee Member
Benjamin Franklin Pugh, Committee Member
Joseph C. Reese, Committee Member
Robert Paulson, Committee Member
Juliette T J Lecomte, Committee Member

Open Access

Author:: Oh, Hyung Suk
Title:: INSIGHT INTO POLIOVIRUS GENOME REPLICATION AND ENCAPSIDATION REVEALED FROM MOLECULAR CHARACTERIZATION OF 3B-3C CLEAVAGE SITE MUTANTS
Graduate Program:: Biochemistry, Microbiology, and Molecular Biology
Keywords:: cleavage site mutant
polyprotein processing
replication
poliovirus
complementation
File:: Download Oh_Dissertation_111809.pdf
Committee Members:: Craig Eugene Cameron, Dissertation Advisor/Co-Advisor
Craig Eugene Cameron, Committee Chair/Co-Chair
Kenneth Charles Keiler, Committee Member
B Tracy Nixon, Committee Member
Joseph C. Reese, Committee Member
Philip C. Bevilacqua, Committee Member

Open Access

Author:: Kruk, Jennifer Ann
Title:: The Ccr4-Not complex regulates transcription elongation and chromatin modifications
Graduate Program:: Biochemistry, Microbiology, and Molecular Biology
Keywords:: Ccr4-Not
chromatin
transcription
histone methylation
elongation
RNAPII
File:: Download JK_Dissertation_v8.pdf
Committee Members:: Joseph C. Reese, Dissertation Advisor/Co-Advisor
Joseph C. Reese, Committee Chair/Co-Chair
Craig Eugene Cameron, Committee Member
David Scott Gilmour, Committee Member
Benjamin Franklin Pugh, Committee Member
Liwang Cui, Committee Member
Yanming Wang, Committee Member

Open Access

Author:: Graci, Jason D.
Title:: Evaluation of Nucleoside Analogs With Ambiguous Hydrogen-Bonding Capacity as Antiviral Lethal Mutagens
Graduate Program:: Biochemistry, Microbiology, and Molecular Biology
Keywords:: nucleoside
antiviral
lethal mutagenesis
File:: Download Graci-PhD_thesis-Aug07.pdf
Committee Members:: Craig Eugene Cameron, Committee Chair/Co-Chair
Richard John Frisque, Committee Member
J Martin Bollinger Jr, Committee Member
Joseph C. Reese, Committee Member
John Warren Wills, Committee Member

Open Access

Author:: Psathas, James Nicholas
Title:: Analysis of the Histone N-termini in Transcriptional Regulation
Graduate Program:: Biochemistry, Microbiology, and Molecular Biology
Keywords:: chromatin
histone modifications
transcription
H3
H4
Set2
transcription elongation
splicing
transcription termination
methylation
File:: Download JNP_Dissertation_v10.pdf
Committee Members:: Joseph C. Reese, Dissertation Advisor/Co-Advisor
Joseph C. Reese, Committee Chair/Co-Chair
David Scott Gilmour, Committee Member
Benjamin Franklin Pugh, Committee Member
Song Tan, Committee Member
Hong Ma, Committee Member

Open Access

Author:: Huisinga, Kathryn Louise
Title:: GLOBAL REGULATION OF GENE EXPRESSION IN SACCHAROMYCES CEREVISIAE VIA TATA BINDING PROTEIN REGULATORY FACTORS
Graduate Program:: Biochemistry, Microbiology, and Molecular Biology
Keywords:: TATA Binding Protein
transcription
genome-wide profile
microarray
File:: Download Huisinga_thesis_revisions_full_all.pdf
Committee Members:: Benjamin Franklin Pugh, Committee Chair/Co-Chair
Joseph C. Reese, Committee Member
Ross Cameron Hardison, Committee Member
Naomi S Altman, Committee Member

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