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Author:

Ghosh, Sujana

Title:

Genome-wide studies of transcriptional responses in yeast (Saccharomyces cerevisiae)

Graduate Program:

Biochemistry, Microbiology, and Molecular Biology

Keywords:

transcription
microarrays
ChIP-exo

File:

Download Sujana_Ghosh_Thesis_2013.pdf

Committee Members:

Benjamin Franklin Pugh, Dissertation Advisor/Co-Advisor
Benjamin Franklin Pugh, Committee Chair/Co-Chair
Joseph C. Reese, Committee Member
David Scott Gilmour, Committee Member
Ross Cameron Hardison, Committee Member
Dr Debashis Ghosh, Committee Member
Scott Brian Selleck, Special Member

Author:

Yeung, Simon

Title:

Expanding the Versatility of the PS I-HydA Nanoconstruct

Graduate Program:

Biochemistry, Microbiology, and Molecular Biology

Keywords:

photosystem
hydrogenase
HydA
N75
crosslinker
BIDBE
DTME
molecular wire
nanoconstruct

File:

Download Yeung_SS_Thesis_2013.pdf

Committee Members:

Donald Ashley Bryant, Thesis Advisor/Co-Advisor
John H Golbeck, Thesis Advisor/Co-Advisor
John Michael Regan, Thesis Advisor/Co-Advisor

Author:

Tamanaha, Esta Yuuka

Title:

Showcasing two C-h bond-cleaving manifolds through mechanistic studies of isopenicillin N synthase

Graduate Program:

Biochemistry, Microbiology, and Molecular Biology

Keywords:

IPNS
isopenicillin N synthase
ACV
ferryl
ferric-superoxide

File:

Download Esta_Dissertation-GradSchoolFinal5-CorrectedSubmission.pdf

Committee Members:

Joseph M Bollinger Jr., Dissertation Advisor/Co-Advisor
Carsten Krebs, Dissertation Advisor/Co-Advisor
Squire J Booker, Committee Member
Ming Tien, Committee Member
Philip C. Bevilacqua, Committee Member

Author:

Achary, Bhavana Gopalakrishnan

Title:

Role of chromatin in promoter proximal pausing in Drosophila

Graduate Program:

Biochemistry, Microbiology, and Molecular Biology

Keywords:

chromatin
pausing
nucleosome positioning
histone deacetylases

File:

Download S_thesis_formatted_Bhavana_Achary.pdf

Committee Members:

David Scott Gilmour, Dissertation Advisor/Co-Advisor
David Scott Gilmour, Committee Chair/Co-Chair
Song Tan, Committee Member
Joseph C. Reese, Committee Member
Yanming Wang, Committee Member
Pamela Hankey Giblin, Special Member

Author:

Dassama, Laura Massah

Title:

Mechanistic Investigations of Class I Ribonucleotide Reductases and Related Oxygen-utilizing Metalloenzymes

Graduate Program:

Biochemistry, Microbiology, and Molecular Biology

Keywords:

Ribonucleotide Reductase
metalloenzymes
dioxygen activation
Mössbauer
chlorite dismutase
electron paramagnetic resonance

File:

Download thesis-Dassama-FINAL_FINAL.pdf

Committee Members:

Joseph M Bollinger Jr., Dissertation Advisor/Co-Advisor
Carsten Krebs, Dissertation Advisor/Co-Advisor
Squire J Booker, Committee Member
Ming Tien, Committee Member
Christopher Howard House, Committee Member

Author:

Hao, Sijie

Title:

Investigation into the Role of A0 Axial Ligand MET Residue in Photosystem I of Cyanobacteria

Graduate Program:

Biochemistry, Microbiology, and Molecular Biology

Keywords:

Photosystem I
A0
Protein cofactor interaction
HYSCORE EPR

File:

Download Thesis_Final.pdf

Committee Members:

John H Golbeck, Thesis Advisor/Co-Advisor
Donald Ashley Bryant, Thesis Advisor/Co-Advisor
Lasse Jensen, Thesis Advisor/Co-Advisor

Author:

Ramadoss, Nitya S

Title:

The trans-translation pathway as a target for broad-spectrum antibacterial development

Graduate Program:

Biochemistry, Microbiology, and Molecular Biology

Keywords:

trans-translation
tmRNA
antibiotic development
small molecules
Shigella flexneri

File:

Download ramadoss_dissertation.pdf

Committee Members:

Kenneth Charles Keiler, Dissertation Advisor/Co-Advisor
Kenneth Charles Keiler, Committee Chair/Co-Chair
Sarah Ellen Ades, Committee Member
Squire J Booker, Committee Member
Katsuhiko Murakami, Committee Member
Edward G Dudley, Committee Member

Author:

Hu, Jing

Title:

Roles of hepatoma-derived growth factor related protein 2 and ovary kidney and liver protein 38 in cell growth, apoptosis and DNA damage response

Graduate Program:

Biochemistry, Microbiology, and Molecular Biology

Keywords:

HDGF2
OKL38
Cell growth
Apoptosis
DNA damage response

File:

Download JingHu_Thesis_2013.pdf

Committee Members:

Yanming Wang, Dissertation Advisor/Co-Advisor
Yanming Wang, Committee Chair/Co-Chair
David Scott Gilmour, Committee Member
Ying Gu, Committee Member
Zhi Chun Lai, Committee Member
Na Xiong, Committee Member

Author:

Sun, Junlei

Title:

Light harvesting and primary charge separation in cyanobacterial Photosystem I

Graduate Program:

Biochemistry, Microbiology, and Molecular Biology

Keywords:

Cyanobacterium
photosynthesis
Photosystem I
charge separation
light harvesting
electrochromic band shift
electron transfer

File:

Download Junlei_Sun_Disseration_Final.pdf

Committee Members:

John H Golbeck, Dissertation Advisor/Co-Advisor
John H Golbeck, Committee Chair/Co-Chair
Donald Ashley Bryant, Committee Member
B Tracy Nixon, Committee Member
Carsten Krebs, Committee Member
Lasse Jensen, Committee Member

Author:

Almishwat, Mohammad Ali

Title:

Time-resolved X-ray crystallography of DNA polymerases: A platform for studies in structural and mechanistic enzymology.

Graduate Program:

Biochemistry, Microbiology, and Molecular Biology

Keywords:

DNA polymerase
X-ray crystallography
Time-reolved

File:

Download Mohammad_Almishwat_MS_2013.pdf

Committee Members:

Katsuhiko Murakami, Thesis Advisor/Co-Advisor
James Gregory Ferry, Thesis Advisor/Co-Advisor