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Author:

Prabhakara, Shruthi

Title:

Clustering Algorithms for Next-generation Sequencing Data from Heterogeneous Populations

Graduate Program:

Computer Science and Engineering

Keywords:

Clustering
Metagenomics
Mixture-modeling
Algorithms

File:

Download Shruthi_Prabhakara_Dissertation.pdf

Committee Members:

Raj Acharya, Dissertation Advisor/Co-Advisor
Webb Colby Miller, Committee Member
Mary Poss, Committee Member
Padma Raghavan, Committee Member

Author:

Shantharam, Manu

Title:

Algorithmic Approaches for Enhancing Speedup, Energy and Resiliency Measures of Sparse Scientific Computations

Graduate Program:

Computer Science and Engineering

Keywords:

Sparse scientific computing
high performance computing
performance analysis and modeling

File:

Download Shantharam-Dissertation.pdf

Committee Members:

Padma Raghavan, Dissertation Advisor/Co-Advisor
Mahmut Taylan Kandemir, Committee Member
Mary Jane Irwin, Committee Member
Jia Li, Committee Member

Author:

Jung, Namsoon

Title:

Information Processing and Semantic Correlation in Multimodal, Multilingual, Human Computer Interfaces

Graduate Program:

Computer Science and Engineering

Keywords:

Multimodal human computer interaction (HCI)
Multilingualism
Semantic correlation
Object verification

File:

Download Dissertation_MultiLUM_20121121.pdf

Committee Members:

Raj Acharya, Dissertation Advisor/Co-Advisor
Raj Acharya, Committee Chair/Co-Chair
Padma Raghavan, Committee Member
Guoray Cai, Committee Member
Dr Alan M Mac Eachren, Committee Member
Dr Rajeev Sharma, Special Member

Author:

Kim, Jibum

Title:

Optimization-based Meshing Techniques for Mesh Quality Improvement and Deformation

Graduate Program:

Computer Science and Engineering

Keywords:

Mesh Optimization
Mesh Untangling
Mesh Deformation
Finite Element Method

File:

Download jibum_thesis.pdf

Committee Members:

Suzanne Michelle Shontz, Dissertation Advisor/Co-Advisor
Suzanne Michelle Shontz, Committee Chair/Co-Chair
Jesse Louis Barlow, Committee Member
Padma Raghavan, Committee Member
Qiang Du, Committee Member

Author:

Jung, Myoungsoo

Title:

Design of a Smart Non-volatile Memory Controller: Architecture Modeling, Systems Analysis, Parallel I/o Processing and Scheduling Algorithms

Graduate Program:

Computer Science and Engineering

Keywords:

Solid State Disks
Non-Volatile Memory
Memory Systems
Embedded Systems
Storage Systems
Parallelism
Scheduling Algorithms

File:

Download mythesis.pdf

Committee Members:

Mahmut Taylan Kandemir, Dissertation Advisor/Co-Advisor
Mahmut Taylan Kandemir, Committee Chair/Co-Chair
Padma Raghavan, Committee Member
Chitaranjan Das, Committee Member
Long Qing Chen, Committee Member

Author:

Sharifi, Akbar

Title:

Addressing Power, Performance and End-to-end Qos in Emerging Multicores through system-wide Resource Management

Graduate Program:

Computer Science and Engineering

Keywords:

Multicore Systems
Resource Management
Power
Performance
End-to-End QoS

File:

Download Akbar_Sharifi-Dissertation.pdf

Committee Members:

Mahmut Taylan Kandemir, Dissertation Advisor/Co-Advisor
Mahmut Taylan Kandemir, Committee Chair/Co-Chair
Chitaranjan Das, Committee Member
Padma Raghavan, Committee Member
Qian Wang, Committee Member

Author:

Kultursay, Emre

Title:

Compiler-based Memory Optimizations for High Performance Computing Systems

Graduate Program:

Computer Science and Engineering

Keywords:

Compilers
memory optimizations
high performance computing
application-specific hardware accelerators
many-core processors

File:

Download EmreKultursay-Dissertation.pdf

Committee Members:

Mahmut Taylan Kandemir, Dissertation Advisor/Co-Advisor
Mahmut Taylan Kandemir, Committee Chair/Co-Chair
Padma Raghavan, Committee Member
Mary Jane Irwin, Committee Member
Qian Wang, Committee Member
Kemal Ebcioglu, Special Member

Author:

Liu, Jun

Title:

Compiler Optimizations for SIMD/GPU/Multicore Architectures

Graduate Program:

Computer Science and Engineering

Keywords:

Compiler Optimization
SIMD
GPGPU
Multicore
Scheduling
Data Layout Transformation
Tiling

File:

Download JUN-LIU-Dissertation.pdf

Committee Members:

Mahmut Taylan Kandemir, Dissertation Advisor/Co-Advisor
Mary Jane Irwin, Committee Member
Padma Raghavan, Committee Member
Qian Wang, Committee Member

Author:

Lee, Geun Seop

Title:

Fast Regularized Total Least Squares Methods With applications

Graduate Program:

Computer Science and Engineering

Keywords:

Total Least Squares
Regularization
High Resolution Image Reconstruction
Newton method

File:

Download GeunseopLee-Dissertation.pdf

Committee Members:

Jesse Louis Barlow, Dissertation Advisor/Co-Advisor
Padma Raghavan, Committee Member
Dr Robert Collins, Committee Member
Vishal Monga, Committee Member
Raj Acharya, Committee Member

Author:

Chen, Kuanbei

Title:

Computational Approaches for Integrative Detection of Protein-DNA Interactions

Graduate Program:

Computer Science and Engineering

Keywords:

Computational Biology
Bioinformatics
Peak-Calling
ChIP-seq
Gene regulation
Comparative Genomics

File:

Download Kuan-Bei.dissertation.pdf

Committee Members:

Webb Colby Miller, Dissertation Advisor/Co-Advisor
Webb Colby Miller, Committee Chair/Co-Chair
Dr Yu Zhang, Dissertation Advisor/Co-Advisor
Ross Cameron Hardison, Committee Member
Padma Raghavan, Committee Member
Kamesh Madduri, Committee Member