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Start Over Committee Member Reka Z Albert

51. COMPUTATIONAL INVESTIGATION OF SONGBIRD HVC MICROCIRCUIT FOR PRECISE TIMING

open_access
Open Access
Author:
Tupikov, Yevhen
Title:
COMPUTATIONAL INVESTIGATION OF SONGBIRD HVC MICROCIRCUIT FOR PRECISE TIMING
Graduate Program:
Physics
Keywords:
songbird
HVC
polychronous
precise timing
neural circuit
song learning
song development
sequence growth
File:
Download YevhenTupikov-Dissertation.pdf
Committee Members:
Dezhe Jin, Dissertation Advisor/Co-Advisor
Dezhe Jin, Committee Chair/Co-Chair
Reka Z Albert, Committee Member
Vincent Henry Crespi, Committee Member
Carina Pamela Curto, Outside Member
Nitin Samarth, Program Head/Chair

52. Design Optimization Algorithms for Synthetic Biology Applications

open_access
Open Access
Author:
Halper, Sean
Title:
Design Optimization Algorithms for Synthetic Biology Applications
Graduate Program:
Chemical Engineering
Keywords:
Synthetic Biology
Metabolic Engineering
CRISPR
Design Optimization
Gene Synthesis
File:
Download Halper_Dissertation_Design_Optimization.pdf
Committee Members:
Howard M Salis, Dissertation Advisor/Co-Advisor
Howard M Salis, Committee Chair/Co-Chair
Andrew Zydney, Committee Member
Phillip E Savage, Committee Member
Reka Z Albert, Outside Member
Phillip E Savage, Program Head/Chair

53. Computational Redesign Of Channel Proteins, Enzymes, and Antibodies

open_access
Open Access
Author:
Chowdhury, Ratul
Title:
Computational Redesign Of Channel Proteins, Enzymes, and Antibodies
Graduate Program:
Chemical Engineering
Keywords:
Computational Protein Design
Channel Proteins
Enzyme Engineering
De novo Antibody Design
Integer Optimization
Molecular Mechanics
File:
Download RatulChowdhury_eTD.pdf
Committee Members:
Costas D Maranas, Dissertation Advisor/Co-Advisor
Costas D Maranas, Committee Chair/Co-Chair
Manish Kumar, Committee Member
Michael John Janik, Committee Member
Reka Z Albert, Outside Member
Phillip E Savage, Program Head/Chair

54. Predicting Transcription Factor Binding Using Neural Structured Learning

open_access
Open Access
Author:
Zesati, Natalie
Title:
Predicting Transcription Factor Binding Using Neural Structured Learning
Graduate Program:
Bioinformatics and Genomics
Keywords:
Neural Structured Learning
Convolution Neural Network
NSL
CNN
Transcription Factors
File:
Download ms_thesis_natalieZesati_20201118.pdf
Committee Members:
Shaun Mahony, Thesis Advisor/Co-Advisor
George H Perry, Program Head/Chair
Reka Z Albert, Committee Member

55. Causal logic in Boolean modeling of biological networks

open_access
Open Access
Author:
Maheshwari, Parul
Title:
Causal logic in Boolean modeling of biological networks
Graduate Program:
Physics
Keywords:
Boolean networks
Biological networks
Regulatory functions
Signal transduction network
Attractor
Stable Motifs
Network model
Causal logic
Network motifs
Stomata
guard cells
phosphatases
biomodels
short-term memory
reversibility
feedback loops
oscillating attractor
inference
EMT transition
cancer network
plant biology
calcium signaling
File:
Download PM_thesis_v13.pdf
Committee Members:
Reka Z Albert, Dissertation Advisor/Co-Advisor
Reka Z Albert, Committee Chair/Co-Chair
Sarah Mary Assmann, Committee Member
Dezhe Jin, Committee Member
Carina Pamela Curto, Outside Member
Richard Wallace Robinett, Program Head/Chair

56. Computational Study of Novel Thermal Effects on Neuronal Activity

open_access
Open Access
Author:
Kim, Tae Ken
Title:
Computational Study of Novel Thermal Effects on Neuronal Activity
Graduate Program:
Physics
Keywords:
Neuroscience
Patch-clamp
Micromagnetic
Temperature
Sprague-Dawley rat
Transient suppression
File:
Download TaeKen_Dissertation_final.pdf
Committee Members:
Steven Schiff, Dissertation Advisor/Co-Advisor
Reka Z Albert, Committee Member
Dezhe Jin, Committee Member
Carina Pamela Curto, Outside Member
Nitin Samarth, Program Head/Chair
Steven Schiff, Committee Chair/Co-Chair