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Author:

Raghavan, Ushanandini

Title:

CLUSTERING AND CONNECTIVITY PROBLEMS IN COMPLEX NETWORKS

Graduate Program:

Industrial Engineering

Keywords:

networks
social networks
community detection
wireless sensor networks
clustering
connectivity

File:

Download Raghavan-Dissertation.pdf

Committee Members:

Soundar Kumara, Committee Chair/Co-Chair
Reka Z Albert, Committee Chair/Co-Chair
Dennis Kon Jin Lin, Committee Member
Tao Yao, Committee Member
Arvind Rangaswamy, Committee Member

Author:

Gyrya, Vitaliy

Title:

Effective viscosity and dynamics of suspensions of micro-swimmers

Graduate Program:

Mathematics

Keywords:

Stokes
bacteria
microswimmers
effective viscosity
rheology
interactions
self-propulsion

File:

Download gyrya_dissertation.pdf

Committee Members:

Leonid Berlyand, Dissertation Advisor/Co-Advisor
Leonid Berlyand, Committee Chair/Co-Chair
Andrew Leonard Belmonte, Committee Member
Anna L Mazzucato, Committee Member
Timothy Reluga, Committee Member
Reka Z Albert, Committee Member

Author:

Chung, Wen-Yu

Title:

Uncovering hidden genomic features using computational approaches

Graduate Program:

Computer Science and Engineering

Keywords:

Computational Biology
Bioinformatics
Systems Biology
Molecular Evolution

File:

Download wychung-Dissertation.pdf

Committee Members:

Webb Colby Miller, Dissertation Advisor/Co-Advisor
Webb Colby Miller, Committee Chair/Co-Chair
Anton Nekrutenko, Committee Member
Raj Acharya, Committee Member
Padma Raghavan, Committee Member
Reka Z Albert, Committee Member

Author:

Cheng, Yong

Title:

MAPPING, CONSERVATION AND FUNCTION OF BINDING SITES FOR ERTHYROID TRANSCRIPTION FACTOR GATA1 IN THE MOUSE GENOME

Graduate Program:

Biochemistry, Microbiology, and Molecular Biology

Keywords:

conservation
ChIP-chip
GATA1
function

File:

Download Thesis_yongcheng.pdf

Committee Members:

Ross Cameron Hardison, Dissertation Advisor/Co-Advisor
Ross Cameron Hardison, Committee Chair/Co-Chair
Robert Paulson, Committee Member
Stephan C Schuster, Committee Member
David Scott Gilmour, Committee Member
Reka Z Albert, Committee Member

Author:

Zhao, Zhixin

Title:

FUNCTIONAL PROTEOMICS OF ARABIDOPSIS THALIANA GUARD CELLS UNCOVERS NEW STOMATAL SIGNALING PATHWAYS

Graduate Program:

Plant Physiology

Keywords:

PROTEOMICS
CORRELATION BETWEEN TRANSCRIPTOME AND PROTEOME
GUARD CELL

File:

Download zhixin_Zhao_thesis.pdf

Committee Members:

Sarah Mary Assmann, Committee Chair/Co-Chair
Hong Ma, Committee Member
Ming Tien, Committee Member
Reka Z Albert, Committee Member
Jiaxuan Li, Committee Member

Author:

Campbell, Colin Edward

Title:

complex dynamics of biological systems

Graduate Program:

Physics

Keywords:

complex systems
network theory
systems biology
cancer
ecosystem stability
immune system

File:

Download Dissertation_-_Colin_Campbell.pdf

Committee Members:

Reka Z Albert, Dissertation Advisor/Co-Advisor
Dezhe Jin, Committee Member
Alexay Kozhevnikov, Committee Member
Istvan Albert, Committee Member

Author:

Kumar, Nitin

Title:

Ab Initio Molecular Dynamics Study of Water Dissociation and Proton Dynamics on Rutile and Cassiterite Surfaces

Graduate Program:

Physics

Keywords:

rutile(110)
interface
rutile water interface
proton jump
cassiterite water interface
water dissociation
ab initio

File:

Download Thesis_NitinKumar_2012May_Physics.pdf

Committee Members:

Jorge Osvaldo Sofo, Dissertation Advisor/Co-Advisor
Jorge Osvaldo Sofo, Committee Chair/Co-Chair
Renee Denise Diehl, Committee Member
Reka Z Albert, Committee Member
Coray M Colina, Committee Member

Author:

Zhao, Kang

Title:

A multi-level analysis of information and supply flows in social and business networks

Graduate Program:

Information Sciences and Technology

Keywords:

Social networks
supply-chain networks
inter-organizational networks
information flow
influence
online health community.

File:

Download Zhao-Dissertation.pdf

Committee Members:

John Yen, Dissertation Advisor/Co-Advisor
Reka Z Albert, Committee Member
C Lee Giles, Committee Member
Akhil Kumar, Committee Member

Author:

Miller, Aaron James

Title:

Characterization of Emergent Synaptic Topologies in Noisy Neural Networks

Graduate Program:

Physics

Keywords:

learning
STDP
neural network
synaptic topology
synfire chain
event-driven simulation
emergent phenomena
complex network

File:

Download AMiller_dissertation.pdf

Committee Members:

Dezhe Jin, Dissertation Advisor/Co-Advisor
Reka Z Albert, Committee Member
Alexay Kozhevnikov, Committee Member
Patrick James Drew, Committee Member

Author:

Saadatpour Moghaddam, Assieh

Title:

Dynamic Modeling of Biological and Physical Systems

Graduate Program:

Mathematics

Keywords:

Dynamic modeling
Biological networks
Boolean models
Piecewise linear models

File:

Download AssiehSaadatpour_PhD_Dissertation_Final_2012.pdf

Committee Members:

Reka Z Albert, Dissertation Advisor/Co-Advisor
Mark Levi, Dissertation Advisor/Co-Advisor
Reka Z Albert, Committee Chair/Co-Chair
Mark Levi, Committee Chair/Co-Chair
Andrew Leonard Belmonte, Committee Member
Timothy Reluga, Committee Member
John Fricks, Committee Member