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Start Over Year 2023 Committee Member Chitaranjan Das Committee Member David Koslicki

1. Compression Algorithms for de Bruijn Graphs and Uncovering Hidden Assembly Artifacts

open_access
Open Access
Author:
Rahman, Amatur
Title:
Compression Algorithms for de Bruijn Graphs and Uncovering Hidden Assembly Artifacts
Graduate Program:
Computer Science and Engineering (PHD)
Keywords:
de Bruijn graph
compression
k-mer set
colored de Bruijn graph
assembly
unitig
unitig algorithm
assembly artifact
bidirected de Bruijn graph
palindromic unitig
File:
Download psu_phd_amatur.pdf
Committee Members:
Chitaranjan Das, Program Head/Chair
David Koslicki, Major Field Member
Paul Medvedev, Chair & Dissertation Advisor
Francesca Chiaromonte, Outside Unit & Field Member
Mingfu Shao, Major Field Member

2. Modeling a Clinical Acoustic Information System Using Physics-Informed Machine Learning

open_access
Open Access
Author:
Alkhadhr, Shaikhah
Title:
Modeling a Clinical Acoustic Information System Using Physics-Informed Machine Learning
Graduate Program:
Computer Science and Engineering (PHD)
Keywords:
physics-informed neural networks
wave equation
ultrasound therapeutics
numerical modeling
information systems
File:
Download Dissertation_vFinal.pdf
Committee Members:
Chitaranjan Das, Program Head/Chair
Mohamed Almekkawy, Chair & Dissertation Advisor
Kamesh Madduri, Major Field Member
David Koslicki, Major Field Member
Yun Jing, Outside Unit & Field Member