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Author:

Abebe, Demesew F

Title:

EVOLUTION AND ACTIVITY OF AN ERYTHROID CIS-REGULATORY MODULE IN MULTIPLE MAMMALIAN LINEAGES

Graduate Program:

Biochemistry, Microbiology, and Molecular Biology

Keywords:

boreoeutheria
Motif constraint
CIS-REGULATORY MODULE
GATA1

File:

Download DA-Thesis-Final.pdf

Committee Members:

Ross Cameron Hardison, Thesis Advisor/Co-Advisor
Ross Cameron Hardison, Thesis Advisor/Co-Advisor

Author:

Zhang, Ying

Title:

Distinctive Genomic Features of Erythroid Cis-Regulatory Modules

Graduate Program:

Genetics

Keywords:

Cis-Regulatory Modules
GATA1
ESPERR
Word Enumeration
ChIP

File:

Download Thesis.pdf

Committee Members:

Ross Cameron Hardison, Dissertation Advisor/Co-Advisor
Robert Paulson, Committee Chair/Co-Chair
Ross Cameron Hardison, Committee Member
Douglas Cavener, Committee Member
Francesca Chiaromonte, Committee Member
Kateryna Dmytrivna Makova, Committee Member

Author:

Cheng, Yong

Title:

MAPPING, CONSERVATION AND FUNCTION OF BINDING SITES FOR ERTHYROID TRANSCRIPTION FACTOR GATA1 IN THE MOUSE GENOME

Graduate Program:

Biochemistry, Microbiology, and Molecular Biology

Keywords:

conservation
ChIP-chip
GATA1
function

File:

Download Thesis_yongcheng.pdf

Committee Members:

Ross Cameron Hardison, Dissertation Advisor/Co-Advisor
Ross Cameron Hardison, Committee Chair/Co-Chair
Robert Paulson, Committee Member
Stephan C Schuster, Committee Member
David Scott Gilmour, Committee Member
Reka Z Albert, Committee Member

Author:

Jain, Deepti Prakash

Title:

Genome wide dynamics of GATA1 binding provide insights into the mechanisms of erythroid differentiation

Graduate Program:

Biochemistry, Microbiology, and Molecular Biology

Keywords:

GATA1
Next generation sequencing
Quality control
reproducibility
eryhtropoiesis

File:

Download DeeptiJain_dissertation.pdf

Committee Members:

Ross Cameron Hardison, Dissertation Advisor/Co-Advisor
Ross Cameron Hardison, Committee Chair/Co-Chair
Qunhua Li, Committee Member
Robert Paulson, Committee Member
David Scott Gilmour, Committee Member
Benjamin Franklin Pugh, Committee Member

Author:

Dogan, Nergiz

Title:

Elucidating Biological Function of Genomic DNA with Robust Signals of Biochemical Activity: Integrative Genome-wide Studies of Enhancers

Graduate Program:

Biochemistry, Microbiology, and Molecular Biology

Keywords:

Functional genomics
Gene regulation
TAL1
GATA1
Histone modifications
Enhancer assay

File:

Download Dogan_PhDThesis_final.pdf

Committee Members:

Ross Cameron Hardison, Dissertation Advisor/Co-Advisor
Ross Cameron Hardison, Committee Chair/Co-Chair
David Scott Gilmour, Committee Member
Robert Paulson, Committee Member
Philip L Reno, Committee Member
Anton Nekrutenko, Committee Member