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Author:

Chung, Wen-Yu

Title:

Uncovering hidden genomic features using computational approaches

Graduate Program:

Computer Science and Engineering

Keywords:

Computational Biology
Bioinformatics
Systems Biology
Molecular Evolution

File:

Download wychung-Dissertation.pdf

Committee Members:

Webb Colby Miller, Dissertation Advisor/Co-Advisor
Webb Colby Miller, Committee Chair/Co-Chair
Anton Nekrutenko, Committee Member
Raj Acharya, Committee Member
Padma Raghavan, Committee Member
Reka Z Albert, Committee Member

Author:

Chen, Kuanbei

Title:

Computational Approaches for Integrative Detection of Protein-DNA Interactions

Graduate Program:

Computer Science and Engineering

Keywords:

Computational Biology
Bioinformatics
Peak-Calling
ChIP-seq
Gene regulation
Comparative Genomics

File:

Download Kuan-Bei.dissertation.pdf

Committee Members:

Webb Colby Miller, Dissertation Advisor/Co-Advisor
Webb Colby Miller, Committee Chair/Co-Chair
Dr Yu Zhang, Dissertation Advisor/Co-Advisor
Ross Cameron Hardison, Committee Member
Padma Raghavan, Committee Member
Kamesh Madduri, Committee Member

Author:

Sun, Chen

Title:

Scalable and Accurate Algorithms for Search in Genomic Big Data and Analysis of Genetic Variants

Graduate Program:

Computer Science and Engineering

Keywords:

Algorithm
Big Data
Database
Genomics
Probabilistic Data Structures
Data Mining
Parallel Computing
Bioinformatics
Genetic Variants
SNP
Computational Biology

File:

Download ChenSun_dissertation_v0830.pdf

Committee Members:

Paul Medvedev, Dissertation Advisor/Co-Advisor
Paul Medvedev, Committee Chair/Co-Chair
Daniel Kifer, Committee Member
Kamesh Madduri, Committee Member
Michael Degiorgio, Outside Member