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Author:

Ma, Xuan

Title:

Revealing the Transcriptional Regulatory Mechanisms Controlling Floral Development

Graduate Program:

Cell and Developmental Biology

Keywords:

Floral development
microarray
transcriptome
regulatory network

File:

Download Thesis_.pdf

Committee Members:

Hong Ma, Dissertation Advisor/Co-Advisor
Hong Ma, Committee Chair/Co-Chair
Teh Hui Kao, Committee Member
Yinong Yang, Committee Member
Claude Walker Depamphilis, Committee Member
Naomi S Altman, Committee Member

Author:

Dannenberg, Richard Pierce

Title:

Characterization and Oil Response of the Deep Sea Coral-associated Microbiome

Graduate Program:

Biology

Keywords:

oil exposure
deep-sea
Leiopathes glaberrima
microbiome
transcriptome
high-throughput sequencing
Illumina
bacteria

File:

Download DannenbergThesis.pdf

Committee Members:

Iliana Brigitta Baums, Thesis Advisor/Co-Advisor
Charles Raymond Fisher Jr., Thesis Advisor/Co-Advisor

Author:

Yang, Zhenzhen

Title:

studying parasite evolution using comparative transcriptomic and phylogenomic analyses

Graduate Program:

Plant Biology

Keywords:

parasitic plants
haustoria
transcriptome
phylogenomic
gene duplication
co-option
horizontal gene transfer

File:

Download ZhenzhenYang_dissertation_final_14April2016.pdf

Committee Members:

Claude W De Pamphilis, Dissertation Advisor/Co-Advisor
Claude W De Pamphilis, Committee Chair/Co-Chair
Charles T Anderson, Committee Member
Yinong Yang, Committee Member
Naomi S Altman, Special Member

Author:

Tan, Qixian

Title:

Characterization and transcriptome analysis of a silent allele of the Unstable factor for orange1 in maize

Graduate Program:

Agronomy

Keywords:

maize
epigenetics
inheritance
transcriptome

File:

Download Thesis_QixianTan.pdf

Committee Members:

Surinder Chopra, Thesis Advisor/Co-Advisor

Author:

Williams, Justin Stephen

Title:

Biochemical Recognition Specificity and Evolution of S-locus F-box Genes in Petunia Based Self-Incompatibility

Graduate Program:

Biochemistry, Microbiology, and Molecular Biology

Keywords:

self-incompatibility
petunia
SI
SLF
transcriptome
self/non-self recognition
solanaceae
genome assembly
S-ribonuclease
S-RNase
S-locus F-box
F-box

File:

Download JSWilliams_Dissertation_Oct_2016.pdf

Committee Members:

Dr. Teh-hui Kao, Dissertation Advisor/Co-Advisor
Dr. Teh-hui Kao, Committee Chair/Co-Chair
Dr. Wendy Hanna-Rose, Committee Member
Dr. Ross C. Hardison, Committee Member
Dr. Claude W. dePamphilis, Outside Member

Author:

Rivera Vega, Loren Jackeline

Title:

CHARACTERIZATION AND IDENTIFICATION OF HOST PLANT DRIVEN PLASTICITY OF THE CABBAGE LOOPER (TRICHOPLUSIA NI) SALIVA

Graduate Program:

Entomology

Keywords:

entomology
chemical ecology
phenotypic plasticity
transcriptome
proteome
cabbage looper
caterpillar saliva
plant-insect interactions
host plant

File:

Download 2017_Loren_Rivera_Vega_Dissertation_final-2.pdf

Committee Members:

Gary Felton, Dissertation Advisor/Co-Advisor
Gary Felton, Committee Chair/Co-Chair
Edwin George Rajotte, Committee Member
Christina M Grozinger, Committee Member
Dawn S Luthe, Outside Member
James Homer Tumlinson III, Committee Member

Author:

Zhang, Huiting

Title:

phylogenetic and functional studies on parasitism genes in Orobanchaceae and Convolulaceae

Graduate Program:

Plant Biology

Keywords:

Parasitic plants
cell wall
phylogenomics
transcriptome
molecular biology
host-induced-gene-silencing

File:

Download Huiting_Zhang_umi_agreement_papersub_submit.pdfDownload CertificateOfCompletion.pdfDownload Huiting_Zhang_Dissertation.pdf

Committee Members:

Claude Walker Depamphilis, Dissertation Advisor/Co-Advisor
Claude Walker Depamphilis, Committee Chair/Co-Chair
Michael Axtell, Committee Member
Charles T Anderson, Committee Member
Yinong Yang, Outside Member
Teh-Hui Kao, Program Head/Chair

Author:

Da Silva, Maria

Title:

Immunological and Endometrial Changes of Early Pregnancy in Dairy Cattle

Graduate Program:

Integrative and Biomedical Physiology

Keywords:

immune cells
endometrium
blood
transcriptome
angiogenesis
AHR
HIF1A
progesterone receptors
pregnancy
cattle

File:

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Committee Members:

Joy Pate, Major Field Member
Gary Perdew, Outside Unit & Field Member
Troy Ott, Chair & Dissertation Advisor
Alison Gernand, Major Field Member
Gregory Shearer, Program Head/Chair

Author:

Hughey, Jordan

Title:

In-silico modeling gene expression utilizing genomic activity and 3D contact information

Graduate Program:

Bioinformatics and Genomics (PhD)

Keywords:

gene regulation
transcriptome
association studies
machine learning
epigenomics
epigenetics

File:

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Committee Members:

Dajiang Liu, Chair & Dissertation Advisor
Shaun Mahony, Major Field Member
James Broach, Outside Unit & Field Member
Santhosh Girirajan, Major Field Member
George H Perry, Program Head/Chair