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2. Genomic Structure of an E. coli O157:H7 Super-Shedder Isolate with Increased Adherence to Bovine RSE Cells

open_access
Open Access
Author:
Cote, Rebecca Ann
Title:
Genomic Structure of an E. coli O157:H7 Super-Shedder Isolate with Increased Adherence to Bovine RSE Cells
Graduate Program:
Immunology and Infectious Diseases
Keywords:
E. coli
super-shedders
genome
sequencing
RSE cells
File:
Download Thesis_Cote_Rebecca.pdf
Committee Members:
Vivek Kapur, Thesis Advisor/Co-Advisor
Subhashinie Kariyawasam, Thesis Advisor/Co-Advisor
Edward G Dudley, Thesis Advisor/Co-Advisor
Chitrita Debroy, Thesis Advisor/Co-Advisor

3. A molecular analysis of subsurface microbial communities across a hydrothermal gradient in Okinawa Trough sediments

open_access
Open Access
Author:
Brandt, Leah Danielle
Title:
A molecular analysis of subsurface microbial communities across a hydrothermal gradient in Okinawa Trough sediments
Graduate Program:
Geosciences
Keywords:
subsurface
hydrothermal
diversity
sequencing
microbial
File:
Download Brandt_Dissertation_revised2_2016.pdf
Committee Members:
Christopher Howard House, Dissertation Advisor/Co-Advisor

4. STATISTICAL METHODS FOR COMAPRING NEXT-GENERATION SEQUENCING DATA REPRODUCIBILITY, SIMILARITY AND DIFFERENTIATION

open_access
Open Access
Author:
Yang, Tao
Title:
STATISTICAL METHODS FOR COMAPRING NEXT-GENERATION SEQUENCING DATA REPRODUCIBILITY, SIMILARITY AND DIFFERENTIATION
Graduate Program:
Bioinformatics and Genomics
Keywords:
sequencing
reproducibility
quality control
ChIP-seq
Hi-C
differential interaction
genomics
File:
Download TaoYang_dissertation_2018_FinalVersion.pdf
Committee Members:
Qunhua Li, Dissertation Advisor/Co-Advisor
Qunhua Li, Committee Chair/Co-Chair
Shaun Mohany, Committee Member
Yu Zhang, Committee Member
Ross Hardison, Outside Member
Feng Yue, Dissertation Advisor/Co-Advisor

5. The microbiome and coral health: resilience and susceptibility in the face of a changing ocean

restricted_to_institution
Restricted (Penn State Only)
Author:
Roitman, Sofia
Title:
The microbiome and coral health: resilience and susceptibility in the face of a changing ocean
Graduate Program:
Biology (PHD)
Keywords:
microbiome
coral reef
NGS
metagenomics
amplicon
sequencing
bioinformatics
bioindicators
File:
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Committee Members:
Stephen Schaeffer, Major Field Member
Carolee Bull, Outside Unit & Field Member
Roberto Iglesias-Prieto, Chair of Committee
Monica Medina, Major Field Member & Dissertation Advisor
Elizabeth Mcgraw, Program Head/Chair

6. Sequencing Biases in Langauge and Motor Planning: A Comparative Study of Humans And Bonobos

restricted_to_institution
Restricted (Penn State Only)
Author:
Schwob, Natalie
Title:
Sequencing Biases in Langauge and Motor Planning: A Comparative Study of Humans And Bonobos
Graduate Program:
Psychology (PHD)
Keywords:
sequencing
planning
evolution
motor planinng
language planning
domain general
bonobos
File:
Login to Download
Committee Members:
Elisabeth Karuza, Major Field Member
Daniel Weiss, Chair & Dissertation Advisor
Rick Gilmore, Major Field Member
Navin Viswanathan, Outside Unit & Field Member
Kristin Buss (she/her), Program Head/Chair