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Author:

Duarte, Jill Marie

Title:

The Impact of Gene Duplication on Molecular Evolution in Flowering Plants

Graduate Program:

Biology

Keywords:

regulatory genes
basal angiosperms
phylogenomics
454
pyrosequencing
ESTs
angiosperms
single copy nuclear genes
gene duplication
expression divergence

File:

Download DuarteDissertationFinal.pdf

Committee Members:

Claude Walker Depamphilis, Committee Chair/Co-Chair
Naomi S Altman, Committee Member
Hong Ma, Committee Member
Kateryna Dmytrivna Makova, Committee Member
Webb Colby Miller, Committee Member

Author:

Quan, Li

Title:

FUNCTIONAL AND EVOLUTIONARY ANALYSES OF KINESIN AND MEIOTIC GENES IN PLANTS

Graduate Program:

Biology

Keywords:

kinesin
meiosis
spindle
gene duplication
homologous recombination
functional divergence

File:

Download Dissertation-Li_Quan.pdf

Committee Members:

Hong Ma, Committee Chair/Co-Chair
Teh Hui Kao, Committee Member
Richard Cyr, Committee Member
Zhi Chun Lai, Committee Member

Author:

Meisel, Richard P

Title:

GENE DUPLICATION AND CHROMOSOMAL REARRANGEMENT IN DROSOPHILA GENOMES

Graduate Program:

Genetics

Keywords:

population genetics
genomics
chromosomal rearrangement
gene duplication
Drosophila
meiotic drive
sex chromosomes

File:

Download __meisel_thesis_2008_07_08_.pdf

Committee Members:

Claude W De Pamphilis, Committee Chair/Co-Chair
Stephen Wade Schaeffer, Committee Member
Hiroshi Akashi, Committee Member
Bruce A Mc Pheron, Committee Member
Wojciech Makalowski, Committee Member

Author:

Zhou, Xiaofan

Title:

UNDERSTANDING EVOLUTIONARY HISTORY USING MOLECULAR PHYLOGENETICS: FROM GENES TO GENOMES

Graduate Program:

Cell and Developmental Biology

Keywords:

genome duplication
gene duplication
histone demethylase
epigenetics
evolution
tree of life
single-copy gene

File:

Download ZhouX_PhD_Dissertation.pdf

Committee Members:

Hong Ma, Dissertation Advisor/Co-Advisor
Hong Ma, Committee Chair/Co-Chair
Claude Walker Depamphilis, Committee Member
Zhi Chun Lai, Committee Member
David Michael Geiser, Committee Member

Author:

Yang, Zhenzhen

Title:

studying parasite evolution using comparative transcriptomic and phylogenomic analyses

Graduate Program:

Plant Biology

Keywords:

parasitic plants
haustoria
transcriptome
phylogenomic
gene duplication
co-option
horizontal gene transfer

File:

Download ZhenzhenYang_dissertation_final_14April2016.pdf

Committee Members:

Claude W De Pamphilis, Dissertation Advisor/Co-Advisor
Claude W De Pamphilis, Committee Chair/Co-Chair
Charles T Anderson, Committee Member
Yinong Yang, Committee Member
Naomi S Altman, Special Member

Author:

Locatelli, Nicolas

Title:

Genomic Insights into Coral Evolution and Adaptation: A Comparative Study of Caribbean Reef-Builders

Graduate Program:

Biology

Keywords:

coral
evolution
genome
assembly
synteny
GWAS
polygenic
speciation
Acropora
Orbicella
Siderastrea
Dendrogyra
Colpophyllia
gene duplication
coalescent
heat stress

File:

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Committee Members:

Elizabeth Mcgraw, Program Head/Chair
Zachary Szpiech, Major Field Member
Iliana B Baums, Special Member
Todd Lajeunesse, Chair of Committee
Emily Davenport, Major Field Member & Dissertation Advisor
Jason Keagy, Outside Unit & Field Member