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Author:

Hossain, Ayaan

Title:

Advanced algorithms for the design and analysis of synthetic genetic parts

Graduate Program:

Bioinformatics and Genomics (PhD)

Keywords:

automated
design
synthetic
genetic
parts
combinatorial
optimization
machine
learning
algorithm
promoter
mRNA
transcription
translation
decay
repression
CRISPR
repeats
interference
graph
theory
path
finding
nonrepetitive
repetitive
gene
synthesis
assembly
oligopool
discovery
barcodes
primers
counting
NGS
reads
classifier
classification
regressor
regression
random
forest
LASSO
ridge
homologous
recombination
instability
tuning
efficiency
plasmids
genome
engineering
degenerate
IUPAC
vertex
cover
independent
set
initiation

File:

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Committee Members:

Paul Babitzke, Outside Unit Member
Howard Salis, Chair & Dissertation Advisor
Costas Maranas, Major Field Member
Reka Albert, Outside Field Member
George Perry, Program Head/Chair

Author:

Hojjatinia, Sarah

Title:

System Identification Algorithms for Noisy Data with Application to Behavior Modeling

Graduate Program:

Electrical Engineering

Keywords:

System identification
data analysis
modeling
physical activity
behavior
machine learning
algorithm
noisy data
social network
switched systems
markov
design
SARMAX
SARX
Markov jump
hybrid
health
Real Data

File:

Download Sarah-Dissertation_Final.pdf

Committee Members:

Constantino Manuel Lagoa, Dissertation Advisor/Co-Advisor
Constantino Manuel Lagoa, Committee Chair/Co-Chair
Vishal Monga, Committee Member
Minghui Zhu, Committee Member
David E Conroy, Outside Member
Kultegin Aydin, Program Head/Chair