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Author:

Honaas, Loren Axel

Title:

Tissue specific de novo transcriptomics in the parasitic Orobanchaceae

Graduate Program:

Plant Biology

Keywords:

Orobanchaceae
Laser Microdissection
Expansin
RNA Seq
Illumina
Triphysaria
Orobanche
Striga
de novo assembly

File:

Download Loren_Honaas_dissertation.pdfDownload Appendices.zip

Committee Members:

Claude Walker Depamphilis, Dissertation Advisor/Co-Advisor
Daniel J Cosgrove, Committee Member
Gabriele Brigitte Monshausen, Committee Member
Dawn S Luthe, Special Member
Naomi S Altman, Special Member

Author:

Wafula, Eric

Title:

Computational methods for comparative genomics of non-model species: a case study in the parasitic plant family Orobanchaceae

Graduate Program:

Biology

Keywords:

Computational biology
Evolutionary biology
Bioinformatics
Comparative genomics
Next-generation sequencing
de novo assembly
Genome annotation
Gene expression
Whole genome duplication
Gene duplication
Phylogenomics
Ancestral reconstruction
Transcriptomics
Orthogroups
Gene family evolution
Parasitic plants
Orobanchaceae
Striga

File:

Download Eric_wafula_dissertation_final_submission.pdf

Committee Members:

Claude Walker Depamphilis, Dissertation Advisor/Co-Advisor
James Harold Marden, Committee Chair/Co-Chair
Istvan Albert, Outside Member
Naomi S Altman, Outside Member
Stephen Wade Schaeffer, Program Head/Chair