1. An Enhancer-Based Deep Learning Approach for Studying Viral Regulation Open Access Author: Cooper, Rachel Title: An Enhancer-Based Deep Learning Approach for Studying Viral Regulation Graduate Program: Bioinformatics and Genomics Keywords: Deep LearningBioinformaticsGene RegulationEnhancersVirusHSV-1 File: Download RCooper_BGEN_final_masters_thesis.pdf Committee Members: Shaun Mahony, Thesis Advisor/Co-AdvisorMoriah Louise Szpara, Committee MemberGeorge H Perry, Program Head/Chair
2. Cross-Species Prediction of Transcription Factor Binding Restricted (Penn State Only) Author: Agarwala, Vandana Title: Cross-Species Prediction of Transcription Factor Binding Graduate Program: Statistics (MS) Keywords: BioinformaticsDeep LearningGene RegulationDomain AdaptationTransfer LearningComputational BiologyMachine Learning File: Login to Download Committee Members: Shaun Mahony, Thesis Advisor/Co-AdvisorQunhua Li, Thesis Advisor/Co-AdvisorEphraim Hanks, Professor in Charge/Director of Graduate StudiesXiang Zhu, Committee Member