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Author:

Hughey, Jordan

Title:

In-silico modeling gene expression utilizing genomic activity and 3D contact information

Graduate Program:

Bioinformatics and Genomics (PhD)

Keywords:

gene regulation
transcriptome
association studies
machine learning
epigenomics
epigenetics

File:

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Committee Members:

Dajiang Liu, Chair & Dissertation Advisor
Shaun Mahony, Major Field Member
James Broach, Outside Unit & Field Member
Santhosh Girirajan, Major Field Member
George H Perry, Program Head/Chair

Author:

Eckert, Scott

Title:

Studying risk factors for antibiotic resistance from population-scale microbiome data and machine learning

Graduate Program:

Bioinformatics and Genomics (PhD)

Keywords:

Microbiome
bioinformatics
antibiotic resistance
idiopathic pulmonary fibrosis
statistical genetics
machine learning

File:

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Committee Members:

Dajiang Liu, Chair & Dissertation Advisor
James Broach, Major Field Member & Dissertation Advisor
Leslie Parent, Outside Unit & Field Member
Emily Davenport, Major Field Member
David Koslicki, Program Head/Chair

Author:

Liu, Zhihan

Title:

Novel machine learning methods for interpreting human genetic variants

Graduate Program:

Molecular, Cellular, and Integrative Biosciences (PHD)

Keywords:

machine learning
copy number variation
de novo mutation
pathogenicity prediction
penetrance estimation

File:

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Committee Members:

Melissa Rolls, Program Head/Chair
Qunhua Li, Outside Unit & Minor Member
Mingfu Shao, Outside Field Member
Dajiang Liu, Outside Unit Member
Shaun Mahony, Major Field Member
Santhosh Girirajan, Chair & Dissertation Advisor