1. Manifold Learning in Structural Biology: Docking, Folding, and Simulation Open Access Author: Sha, Congzhou Title: Manifold Learning in Structural Biology: Docking, Folding, and Simulation Graduate Program: Engineering Science and Mechanics (PHD) Keywords: differentiable programmingmachine learningneural networksstructural biologyLie groupstatistical mechanicsmolecular dynamicsRNA structuredifferential geometry File: Download Sha_dissertation-Final.pdf Committee Members: Albert Segall, Program Head/ChairElizabeth Proctor, Major Field MemberMehrdad Mahdavi, Outside Field MemberNikolay Dokholyan, Chair & Dissertation AdvisorRaymond Hohl, Outside Unit Member