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Author:

Barchinger, Sarah

Title:

The Role and Regulation of the Extracytoplasmic Function Sigma Factor Sige in Bordetella bronchiseptica

Graduate Program:

Biochemistry, Microbiology, and Molecular Biology

Keywords:

extracytoplasmic function sigma factor
Bordetella bronchiseptica
stress response
cell envelope
respiratory pathogen
anti-sigma factor

File:

Download BarchingerDissertationFinal.pdf

Committee Members:

Sarah Ellen Ades, Dissertation Advisor/Co-Advisor
Eric Thomas Harvill, Committee Member
Paul Lee Babitzke, Committee Member
B Tracy Nixon, Committee Member
Edward G Dudley, Committee Member

Author:

Iyer Prashanti, Radhakrishnan

Title:

Biochemical characterization of the proteins involved in Gluconacetobacter hansenii cellulose synthesis

Graduate Program:

Integrative Biosciences

Keywords:

Acetobacter
xylinus
cellulose sythesis
Gluconacetobacter
proteins
membrane

File:

Download Iyer_PR__Thesis.pdf

Committee Members:

Ming Tien, Dissertation Advisor/Co-Advisor
B Tracy Nixon, Committee Member
Nicole Robitaille Brown, Committee Member
Charles T Anderson, Special Member

Author:

Huang, Jiehuan

Title:

Functional recognition of the nucleosome by the chromatin factors Piccolo NuA4 and RCC1/Ran

Graduate Program:

Biochemistry and Molecular Biology

Keywords:

nucleosome
histone acetyltransferase
UV crosslinking
chromatin

File:

Download JH_Huang_Dissertation_Final.pdf

Committee Members:

Song Tan, Dissertation Advisor/Co-Advisor
David Scott Gilmour, Committee Member
B Tracy Nixon, Committee Member
Joseph C. Reese, Committee Member
Philip C. Bevilacqua, Committee Member

Author:

Li, Jian

Title:

Two Widespread DNA Binding Factors Mediate Differential Regulation of Promoter-proximal Pausing in Drosophila.

Graduate Program:

Biochemistry, Microbiology, and Molecular Biology

Keywords:

Transcription regulation
promoter-proximal pausing
DNA binding factors
permanganate-ChIP-seq
nucleosome

File:

Download Jian_thesis_final.pdf

Committee Members:

David Scott Gilmour, Dissertation Advisor/Co-Advisor
David Scott Gilmour, Committee Chair/Co-Chair
Joseph C. Reese, Committee Member
B Tracy Nixon, Committee Member
Benjamin Franklin Pugh, Committee Member
Debashis Ghosh, Committee Member

Author:

Chowdhury, Saikat

Title:

Ring Asymmetry in the bacterial Enhancer Binding Proteins guides interaction with Sigma 54 form of RNA Polymerase

Graduate Program:

Biochemistry, Microbiology, and Molecular Biology

Keywords:

bEBPs
RNA polymerase
Sigma 54
AAA+ ATPase
bacterial transcription
NtrC1

File:

Download CHOWDHURY_Saikat_Thesis_Final.pdf

Committee Members:

B Tracy Nixon, Dissertation Advisor/Co-Advisor
B Tracy Nixon, Committee Chair/Co-Chair
Kathleen Postle, Committee Member
David Scott Gilmour, Committee Member
John H Golbeck, Committee Member
William O Hancock, Committee Member

Author:

Iyer Prashanti, Radhakrishnan

Title:

BIOCHEMICAL CHARACTERIZATION OF THE PROTEINS INVOLVED IN GLUCONACETOBACTER HANSENII CELLULOSE SYNTHESIS

Graduate Program:

Integrative Biosciences

Keywords:

Gluconacetobacter
Acetobacter
xylinus
protein
membrane

File:

Download Iyer_PR__Thesis.pdfDownload 1-Iyer_PR__Thesis.pdfDownload MudPIT_data.xlsx

Committee Members:

Ming Tien, Dissertation Advisor/Co-Advisor
B Tracy Nixon, Committee Member
Nicole Robitaille Brown, Committee Member
Charles T Anderson, Committee Member

Author:

Baker, Kristin Renee

Title:

Characterization of ExbB Transmembrane Domains for Tonb-dependent Energy Transduction in Escherichia coli

Graduate Program:

Biochemistry, Microbiology, and Molecular Biology

Keywords:

ExbB
TonB
Energy Transduction
Membrane protein
Escherichia coli

File:

Download K_Baker_Final.pdf

Committee Members:

Kathleen Postle, Dissertation Advisor/Co-Advisor
Sarah Ellen Ades, Committee Member
B Tracy Nixon, Committee Member
Lorraine C Santy, Committee Member
Timothy W Mcnellis, Committee Member

Author:

Gopalkrishnan, Saumya

Title:

Regulation of the alternative sigma factor,σE, during nutrient limitation in Escherichia coli

Graduate Program:

Biochemistry, Microbiology, and Molecular Biology

Keywords:

sigmaE
ppGpp
starvation
transcription
Escherichia coli

File:

Download Gopalkrishnan_S_Thesis.pdf

Committee Members:

Sarah Ellen Ades, Dissertation Advisor/Co-Advisor
Paul Lee Babitzke, Committee Member
B Tracy Nixon, Committee Member
Katsuhiko Murakami, Committee Member
Edward G Dudley, Special Member
Sarah Ellen Ades, Committee Chair/Co-Chair