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Author:

Missra, Anamika

Title:

BIOCHEMICAL ANALYSIS OF INTERACTIONS OF DSIF AND NELF WITH THE DROSOPHILA RNA POLYMERASE II TRANSCRIPTION ELONGATION COMPLEX

Graduate Program:

Biochemistry, Microbiology, and Molecular Biology

Keywords:

gene regulation
transcription
polymerase

File:

Download Anamika_Missra_Dissertation_Final.pdf

Committee Members:

David Scott Gilmour, Dissertation Advisor/Co-Advisor
David Scott Gilmour, Committee Chair/Co-Chair
Joseph C. Reese, Committee Member
Katsuhiko Murakami, Committee Member
Yanming Wang, Committee Member
Kyung An Han, Committee Member

Author:

Klein, Brianna Joy

Title:

CRYSTAL STRUCTURE AND BIOCHEMICAL ANALYSIS OF ARCHAEAL RNA POLYMERASE TRANSCRIPTION ELONGATION FACTORS

Graduate Program:

Biochemistry, Microbiology, and Molecular Biology

Keywords:

RNA-directed RNA synthesis by DNA-dependent aRNAP
Pyrococcus furiosus Spt4/5
Structure of Spt4/5 at 1.8 Å
Archaeal RNAP
Inhibited TECs With or Without TFS

File:

Download BjK_dissertation_2010.pdf

Committee Members:

Katsuhiko Murakami, Dissertation Advisor/Co-Advisor
Katsuhiko Murakami, Committee Chair/Co-Chair
Paul Lee Babitzke, Committee Member
David Scott Gilmour, Committee Member
B Tracy Nixon, Committee Member
Biao He, Committee Member

Author:

Venters, Bryan Jacob

Title:

HIGH-RESOLUTION GENOME-WIDE ORGANIZATION OF THE YEAST TRANSCRIPTION MACHINERY

Graduate Program:

Biochemistry, Microbiology, and Molecular Biology

Keywords:

ChIP-chip
Tiling microarrays
Pre-initiation complex
Chromatin
Saccharomyces
Mot1

File:

Download 080724_Venters_Thesis.pdf

Committee Members:

Benjamin Franklin Pugh, Committee Chair/Co-Chair
Joseph C. Reese, Committee Member
Ross Cameron Hardison, Committee Member
David Scott Gilmour, Committee Member
Naomi S Altman, Committee Member

Author:

Nelms, Brian Lewis

Title:

SUPPRESSION OF egl-13 SOX DOMAIN MUTANTS REVEALS A NOVEL FUNCTION FOR SOME MEIOTIC GENES

Graduate Program:

Biochemistry, Microbiology, and Molecular Biology

Keywords:

C. elegans
egl-13
him-8
uterine
development

File:

Download PhD_eTD_BLN_August_2006.pdf

Committee Members:

Wendy Hanna Rose, Committee Chair/Co-Chair
Zhi Chun Lai, Committee Member
Pamela J Mitchell, Committee Member
David Scott Gilmour, Committee Member
Richard W Ordway, Committee Member

Author:

Hofstetter, Catherine A.

Title:

JC VIRUS SMALL T ANTIGEN BINDS RB FAMILY PROTEINS AND THE PHOSPHATASE PP2A AND IS REQUIRED FOR EFFICIENT VIRAL DNA REPLICATION ACTIVITY

Graduate Program:

Biochemistry, Microbiology, and Molecular Biology

Keywords:

PP2A
small T antigen
JC Virus
viral DNA replication

File:

Download Hofstetter_thesis_4.6.09.pdf

Committee Members:

Dick Frisque, Dissertation Advisor/Co-Advisor
Richard John Frisque, Committee Chair/Co-Chair
Jean Elnora Brenchley, Committee Member
David Scott Gilmour, Committee Member
Biao He, Committee Member
Kouacou Konan, Committee Member

Author:

Hsu, Chia-Ling

Title:

The role of the Kar2p/BiP chaperone in ER quality control

Graduate Program:

Biochemistry, Microbiology, and Molecular Biology

Keywords:

ER sress tolerance
unfolded protein response
ER quality control
Kar2p/BiP

File:

Download Microsoft_Word_-_Chapter1-another_copy_for_graduate_school.pdf

Committee Members:

Wesley Tsoekjen Ng, Committee Chair/Co-Chair
Sarah Ellen Ades, Committee Member
David Scott Gilmour, Committee Member
Douglas Cavener, Committee Member

Author:

Chitikila, Carmelata

Title:

Genomic, Genetic and Biochemical Characterization of Repression of the TATA-Box Binding Protein

Graduate Program:

Biochemistry, Microbiology, and Molecular Biology

Keywords:

TBP
TAND
transcription
repression
TAFII145
microarray

File:

Download thesis.pdf

Committee Members:

Andrew G Clark, Committee Member
David Scott Gilmour, Committee Member
Esther Siegfried, Committee Member
Robert Allen Schlegel, Committee Member
Benjamin Franklin Pugh, Committee Chair/Co-Chair
Robert T Simpson, Committee Member

Author:

Lee, Chanhyo

Title:

GENOME-WIDE ANALYSIS OF NELF: NELF IS LINKED TO PROMOTER PROXIMAL PAUSING THROUGHOUT THE DROSOPHILA GENOME

Graduate Program:

Biochemistry, Microbiology, and Molecular Biology

Keywords:

elongation
transcription
promoter proximal pausing
NELF
GAGA factor
RNA polymerase II

File:

Download ChanhyoLee_dissertation.pdf

Committee Members:

David Scott Gilmour, Committee Chair/Co-Chair
Benjamin Franklin Pugh, Committee Member
Joseph C. Reese, Committee Member
B Tracy Nixon, Committee Member
Pamela Hankey Giblin, Committee Member
Andrew Thomas Henderson, Committee Member
Richard John Frisque, Committee Member

Author:

Wu, Dai-Chen

Title:

FROM EXPLORING ROLES OF SIGNALS IN STRESS ERYTHROPOIESIS TO IN VITRO EXPANDING STRESS ERYTHROID PROGENITORS THAT ALLEVIATE ANEMIA

Graduate Program:

Biochemistry, Microbiology, and Molecular Biology

Keywords:

Hedgehog
BMP4
hypoxia
hematopoiesis
erythropoiesis
GDF15
anemia
stem cell

File:

Download DC_Wu_Dissertation_Final_renumbered.pdf

Committee Members:

Robert Paulson, Dissertation Advisor/Co-Advisor
Robert Paulson, Committee Member
Douglas Cavener, Committee Member
David Scott Gilmour, Committee Member
Pamela Hankey Giblin, Committee Member
Ross Cameron Hardison, Committee Member

Author:

Rhee, Ho Sung

Title:

GENOME-WIDE ORGANIZATION OF TRANSCRIPTION MACHINERY DETECTED AT SINGLE NUCLEOTIDE RESOLUTION

Graduate Program:

Biochemistry, Microbiology, and Molecular Biology

Keywords:

ChIP-seq
genomic binding locations
transcription factors

File:

Download Rhee_Thesis.pdf

Committee Members:

Benjamin Franklin Pugh, Dissertation Advisor/Co-Advisor
Benjamin Franklin Pugh, Committee Chair/Co-Chair
David Scott Gilmour, Committee Member
Stephan Schuster, Committee Member
Istvan Albert, Committee Member
Debashis Ghosh, Committee Member